Luteitalea pratensis: LuPra_03529
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Entry
LuPra_03529 CDS
T04394
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abac
Luteitalea pratensis
Pathway
abac03410
Base excision repair
abac03430
Mismatch repair
abac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LuPra_03529 (recJ)
03430 Mismatch repair
LuPra_03529 (recJ)
03440 Homologous recombination
LuPra_03529 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abac03400
]
LuPra_03529 (recJ)
DNA repair and recombination proteins [BR:
abac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LuPra_03529 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LuPra_03529 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LuPra_03529 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Death_EDAR
Motif
Other DBs
NCBI-ProteinID:
AMY10299
UniProt:
A0A143PR70
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All DBs
Position
complement(4278871..4280610)
Genome browser
AA seq
579 aa
AA seq
DB search
MRTLIWDPVVCDETAAQSLAAALDVSPVVARLLCHRGHGDPESAHRFLYPQLSQLHDPYG
LTDMRAAVDRLCAALARKERIAIHGDYDVDGVTSTVILRRALELLGGDVTHFIPERLRDG
YGLQVPAVERLHADGVRVIVSVDCGIRSGEAARRARELGVDLIITDHHEPEAVLPSALAV
INPKRPDCTYPDKNLAGVGVAFKVVQALCQRFDREKWLPAFLKLAAIGTVADVVPLVGEN
RIIAKLGLQRLSQGPHTVGLRTLLESAGLQNTAIDGFHVAFVIAPRVNAAGRMSTPDLAT
RLLLASDESQLDQVRRLAEQLGEENTRRQAYEADIVADAKKQVETDVRIGAHNVLVVAGE
GWHRGVIGIVASKLVDAFYKPSIVLSVEDGIAHGSCRSIAAFDMLGALDGCADLFEKYGG
HKQAAGLTMTADRIPEFRDRINAHGLACLEPTDLMPRLRIDSELRLAGIDSRVVAGLEQM
APFGLANAKPVFDATGVELLGTPRRIKDRHLKVQVRQDGRVFNAIAWRAAEKAAQWEQHR
QSLRLAYSLDKQTFRGETTIELTVADLRCPDQTVSPGTA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgctgatctgggaccccgtcgtctgtgacgagacggccgcgcagtcgctggcc
gccgccctcgacgtgtctcccgtcgtcgcccgcctgctgtgtcatcgcggccacggcgac
ccggagtcggcgcatcgcttcctgtatccacagctgtcgcagttgcacgacccctacggg
ctgacggacatgcgtgccgccgtcgatcggctgtgcgccgcgctcgcacgaaaggagcgc
atcgcgatccatggcgactacgacgtcgatggcgtgacctcgacggtgatcctgcgccgg
gcattggaactgctcggcggcgacgtcacgcatttcatcccggagcgcctgcgcgacggc
tacgggctgcaggtgccggccgttgagcgactgcacgccgatggcgtacgggtgatcgtg
tcggtcgattgcggtatccgcagcggcgaggcggcgcgccgtgcgcgcgaactcggcgtc
gatctgatcatcaccgatcatcacgaaccggaggcggtcctgccgtccgcgctggcggtg
atcaacccgaagcgccccgactgcacgtacccggacaagaacctcgcgggcgttggcgtg
gcgttcaaggtcgtccaggccttgtgtcagcggttcgatcgcgagaaatggctgccggcg
ttcctgaaactggcggcgatcggcaccgtcgcggacgtcgttccactggtcggcgagaac
cggatcatcgccaagctcggtctgcaacggctgtcacaagggccgcacaccgtcggcctg
cggacgctgctcgaatcggccggcctgcagaacacggccatcgacgggttccacgtcgcg
ttcgtgattgcgccgcgcgtcaacgcggcaggtcgcatgagcacgcccgacctcgccacg
cgcctgctgctcgcaagcgacgagtcccagctcgaccaagtgcggcggctcgccgagcaa
ctcggcgaagagaacacccgccgccaggcctacgaagccgacatcgtcgccgacgcgaag
aagcaggtcgagaccgacgtccgcatcggcgctcacaacgtcctcgtcgtggcaggcgag
ggctggcatcgcggcgtcatcggcatcgtcgcgtccaagctcgtcgacgcgttctacaag
ccgtcgatcgtcctgtcggtcgaggacggcatcgcgcacggttcgtgccggtctattgcc
gctttcgacatgctcggcgccctcgacggctgtgccgacctgttcgagaagtacggcgga
cacaagcaggccgccggcctgacgatgaccgccgaccgcatcccggaattcagggatcgt
atcaacgcgcacggcctggcctgcctcgaaccgaccgatctgatgccgcggctccggatc
gacagcgaactgcggctcgccggcatcgactcgcgcgtcgtcgccggcctggagcagatg
gcgccattcggcctggccaacgccaagccggtgttcgatgcgactggcgtggagctgctc
gggacgccacggcgcatcaaggatcgacacctcaaggtgcaggtccgccaggacgggcgg
gtcttcaacgcgatcgcgtggcgcgcggcggagaaggccgcgcaatgggagcagcacagg
caatcgctgcgcctcgcgtattcgctggacaagcagaccttccggggcgagaccacgatc
gagttgacggtggccgacctgcggtgtcccgatcagaccgtgtccccggggacggcctga
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