Luteitalea pratensis: LuPra_03699
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Entry
LuPra_03699 CDS
T04394
Symbol
rho_1
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
abac
Luteitalea pratensis
Pathway
abac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LuPra_03699 (rho_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abac03021
]
LuPra_03699 (rho_1)
03019 Messenger RNA biogenesis [BR:
abac03019
]
LuPra_03699 (rho_1)
Transcription machinery [BR:
abac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LuPra_03699 (rho_1)
Messenger RNA biogenesis [BR:
abac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LuPra_03699 (rho_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
ATPase_2
AAA
DnaB_C
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AMY10466
UniProt:
A0A143PQ19
LinkDB
All DBs
Position
complement(4472066..4473451)
Genome browser
AA seq
461 aa
AA seq
DB search
MAPAQKRSGGRRGPRPSGPRRPVNDIPDVANDPPLDLPPEGSEASLRIGQLKEMTIQSLM
QVAQDLGVIGATGLRKQELIFQILKAQTEQSGFIFSEGVLEVLPDGFGFLRAPDYNYLAG
PDDIYVSPSQIRKFDLQTGDTVSGQIRPPKDGERYFALIKVEAVNFEAPEFARNKIFFEN
LTPLYPQARFSLETAKDNLSARVLDLMTPIGKGQRGLIVAPPRTGKTMLLQNIAQSVVQN
HPEVYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAQRHVQVAEMVIEKAKRLVEHKK
DVLILLDSITRLARAYNSVVPPSGKVLSGGVDSNALQKPKRFFGAARNIEEGGSLTIIAT
ALVDTGSRMDEVIFEEFKGTGNMEIHLDRKLVDKRVFPAIDIQKSGTRKEELLIPKDDLN
RIWVLRKVINPLSPTEAMELLIDKLAKAGSNADFLNAMHKP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctccagcacagaagcgctccggcggtcgccgcggaccgcgaccctccggtccccgc
cgccccgtcaacgacatccccgacgtcgccaacgatccaccgctcgatctgccgcccgag
ggcagcgaggccagcttgcggatcggtcagctcaaggagatgaccatccagtcgttgatg
caggtcgcccaggatctcggggtgatcggcgccaccggcttgcgcaagcaggaactgatc
ttccagatcctcaaggcacagaccgagcagagtggcttcatcttctccgagggcgtcctc
gaagtcctgccagacggcttcgggttcctgcgcgcgcccgattacaactacctcgcgggc
cccgacgacatctatgtctcgccctcgcagatccgcaagttcgacttgcagaccggcgat
acggtcagcggccagatcaggccgccgaaggacggcgagcgctacttcgccctgatcaag
gtcgaggccgtcaacttcgaggcgcccgagttcgcgcgcaacaagatcttcttcgagaac
ctgacgcccctgtacccgcaggcgcgcttctcgctcgagaccgccaaggacaacctgtcg
gcccgcgtcctcgacttgatgacgccgatcggcaagggccagcgcgggctgatcgtcgcg
ccgcctcgtaccggcaagacgatgttgctgcagaacatcgcacagtcggtggtgcagaac
caccccgaggtgtacctgatcgtcctgctcatcgacgagcgtccggaagaggtcaccgac
atgcagcgctcggtgcgtggcgaggtgatctcgtcgacgttcgacgagccggcgcagcgc
cacgtacaggtcgcagagatggtgatcgagaaggccaagcgcctcgtcgagcacaagaag
gatgtcctcatcctgctcgactcgatcacccgcctcgcccgcgcctacaacagcgtcgtg
ccgccgtcgggcaaggtgctctcgggtggcgtcgattcgaacgcgctgcagaagccgaag
cgcttcttcggggcggcgcgcaacatcgaggaaggtgggtcgctgacgatcatcgcgacg
gcgctcgtcgataccggctcgcgcatggatgaggtcattttcgaggagttcaagggcacc
ggcaacatggagatccacctggaccgcaagctggtggacaagcgcgtgttcccggccatc
gacatccagaagagcggcacccgcaaggaggaactcctcatcccgaaggacgacctcaac
cgcatctgggtgttgcgcaaggtgatcaacccgttgtcgcccaccgaggcgatggaactg
ctgatcgacaagctcgccaaggccggcagcaacgccgacttcctcaacgcgatgcacaag
ccgtag
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