Luteitalea pratensis: LuPra_03926
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Entry
LuPra_03926 CDS
T04394
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abac
Luteitalea pratensis
Pathway
abac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LuPra_03926 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abac03019
]
LuPra_03926 (recQ_2)
03400 DNA repair and recombination proteins [BR:
abac03400
]
LuPra_03926 (recQ_2)
Enzymes [BR:
abac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LuPra_03926 (recQ_2)
Messenger RNA biogenesis [BR:
abac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LuPra_03926 (recQ_2)
DNA repair and recombination proteins [BR:
abac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LuPra_03926 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
Rrf2
AAA_22
Cas3-like_C_2
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AMY10687
UniProt:
A0A143PPQ1
LinkDB
All DBs
Position
4710302..4711846
Genome browser
AA seq
514 aa
AA seq
DB search
MSTRPRVPGETPSPDHDVPMKSRASGARVSRVIRHVFGLAGLRPGQQAVIDAVLAKRHTL
AIMPTGAGKSLCYQVPAMLMPGMTVVVSPLIALMRDQCDKLSALGLEAVQVNSAIPSGDV
QRARAMIGRRAVEFVFTTPEQLAATELRQLLAGAAVDLVVIDEAHCISQWGHDFRPAYLD
ALSGLRALGSPTVLALTATATPEVIADIERQLDLGPLRVINTGAHRPNLSYQVRPVSSDA
DKQRQLVDIVRATTGSTVVYAATVRHVDALQALFREEGIAATSYHGRRRAVERGESQDAF
MGGAVPIIIATNAFGMGIDKPDIRTVVHYDLPASLDVYYQESGRAGRDGEAADCILLFQR
RDRGLQRFFMAGRYPTHDDFLALIEGLRSATRSNAMTVDAIRSAMPSVAASKLRVMLAAL
KQDGLVRERRGARYELRPQLWTASIEPLVSAYEQRRQRDQTKLEQMVVYAQTALCRTRVL
LEALGETVEWSQCGTCDNCRGLSIRAEAVAEGAA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacggccccgcgttccaggcgaaacgccgtcccccgatcacgacgtcccgatg
aagtcgagagcaagcggcgctcgtgtgtcgagggtcatccgtcacgtcttcggtcttgcg
ggacttcgcccgggccagcaggcggtgattgacgcggtgctcgccaagcgacatacgctc
gcaatcatgcccaccggggctggtaagtcgctgtgctaccaggtgccggccatgctgatg
ccgggcatgaccgtcgtcgtgtcgccgctgatcgcgttgatgcgcgaccagtgcgacaaa
ctgtccgcgctcggcctcgaggccgtccaggtcaacagcgcgattccgagtggcgacgtc
caacgcgcccgcgccatgattggccgtcgtgccgtcgagttcgtgttcacgacgcccgaa
cagcttgcagccacggaactccgtcagttgctggccggcgcggcggtcgatctcgtcgtc
atcgatgaagcccactgcatcagtcaatgggggcacgacttccggccggcgtacctcgac
gctctttcggggctgcgcgcattggggtcgcccacggtcctggcgctcacggcgaccgcg
acacccgaagtgattgccgacatcgaacggcaactggatctcgggcccctgcgtgtgatc
aacaccggggcgcatcgtccgaacctgtcataccaggtgcggcccgtctcgagcgatgcc
gacaaacagcgccaactcgtggacatcgtccgcgcgacgaccggatccaccgtcgtctac
gcggcgacggtgcgccacgtcgacgcactgcaggcgctgtttcgagaagaggggatcgcg
gcgacctcgtaccatggccgccgccgagctgtggagcggggcgagtctcaggacgccttc
atgggcggggcggtgcccatcatcatcgccaccaatgcgtttggcatgggcatcgacaag
cccgacatccgcacggtggtccactatgacctcccagcctcactcgacgtctactaccag
gagtcgggtagagccggccgcgacggcgaggccgccgactgcatcctgctgttccagcga
cgcgaccgggggctgcaacgatttttcatggccggacggtatcccacgcacgacgacttc
ctggcgctgatcgagggcctccgcagtgcgacacggagcaacgcgatgaccgtcgatgcg
atccggagcgccatgccttccgtcgcggcgagcaagcttcgcgtgatgctggctgcgctg
aaacaggatggcctggtccgcgaacgtcgcggtgcgagatacgagctgcggccgcagttg
tggactgcgtccatcgaaccgctcgtgtcggcctacgaacaacgacgtcagcgagaccag
accaagctcgagcagatggtcgtttacgcgcaaacggcgctgtgtcgaacgcgtgtcctg
ctggaggcgctcggcgaaacggtggagtggtcgcaatgcggcacatgcgacaactgccgc
ggcctgtcgattcgcgccgaagccgtcgctgagggagcggcatga
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