Luteitalea pratensis: LuPra_04550
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Entry
LuPra_04550 CDS
T04394
Name
(GenBank) E3 ubiquitin-protein ligase SspH2
Organism
abac
Luteitalea pratensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
TIR_2
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_NWD2_C
Beta-prop_VPS8
TibC_1st
NB-ARC
Beta-prop_Nup120_160
Beta-prop_EIPR1
APAF1_C
NACHT
AAA_22
TIR
Motif
Other DBs
NCBI-ProteinID:
AMY11302
UniProt:
A0A143PRT0
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Position
5390687..5394469
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AA seq
1260 aa
AA seq
DB search
MRDPTTPRVFVSYSRTDGLEFARRLQTALETEDLSLYRDLHDLVGGEDWWRQVEAAIRSV
EHVVLVLSPAALRSPYVAREWKLARQEGKKVSPVSGPGALDFSQLPRWMARAHRHDIDIP
ESLARLVQVLKGPAGEKRVPFMADALPEGFVARPEEFDRLKRSLLDARGEPVAITAALRG
AGGYGKTALANALCHDSDVQEAFSDGILRITLGEKPADLVGSIADLIETLVGERPAFRDI
DPAKVALVDALDDRRCLLVIDDAWRAEDLAPLLYRGLRNQTTRLVTTRDDRVVPREVPRI
AVDAMQSGEAQAMLSRGMPPETAAALRPRLASLAGRLGEWPLVLGLANGVVRTRMSRGAT
VGDALAYVERAIVHRGLAQAFTPDERASRRLTAWGTLEVSLEQLRTDERARFAELAVFVE
DAEIPTSVALGLWRQTAALDPLDGEDLLVRLADLSLLVELDLGRGVLRLHDVVRTLLRDG
PIAGRLSELDRLLVTHYREANDGDLAALRDVYGLRHLMAHLNSAGELQVARGLLTDPAWL
ANKLHRLGIQPLLADYATLSHRDATLDLVRGSLSLAAPALARNAGELAQQLLARLAPGDA
KGLDKFLAHTRRLLVRPTLVPHRPTFTPPGAELRRYEGHEESVTSVTVLADGRRALSGSR
DRTLRLWDLDTGAELRRYEGHSEWVTSVTVLADGRRALSGYSDGALRLWDLETGAELRRF
EGHDNVVTSATVLADGRRALSASADWTLRLWDLESGAQLHRFDGHEDWVASVAVHERYVL
SGSSDRTLRLWDLETGVELRRFEGHEGMVTSVTVLAGGGRALSGSWDRTLRLWDLETGAE
LRRFAGHDNGVTSVTVLADGRRALSASEDRTLRLWDLDTGAELRRFESHAGPVTSVTAMA
DGRRAISASWDRTLRLWDLEAMPELPRFGEHEDRVSSLAVLADGRRALSGSWDRTLRLWD
LETGVELRRLEAHQGLVTSVTVLADGRRALSASDDQTLRLWDLETGTELRRFEGDDRGGN
CITVLPGGRSALLRTDGTFLSDGTTLLLSALETGVELRRFEGHEGKVTSVAVSADGRRAL
SGYSDGTLRLWDLETGAELGRFGQHEGWVTSVTVLADGRRALSASEDRTLRLWDLDMGVE
LHRFAGHRASINSVTVLADGRRALSASETLRLWDLETGVELRRFEGHEGMVTSVTVLAGG
GRALSTSDDQTLRLWDLETGVELARLTFDALPYSLAWSSQRGAAVVGDARGRVHVIDLIE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccccaccacgccgcgcgtgttcgtttcctactcgcgcaccgacggtctagaa
ttcgcacgccggctgcagacggcgctggaaaccgaggatctttccctttaccgcgatctc
cacgatctggtaggcggtgaggattggtggcgccaggtcgaggccgcaattcgtagcgtc
gagcacgtggtgctggtgttgtcgccggccgcgctgcgctcgccctacgtggcgcgggaa
tggaagctcgccaggcaggagggcaagaaggtttcgccggtctctgggccaggcgcgctc
gacttctcacagttgccgcgttggatggcgcgcgcgcatcgtcatgacatcgacattccc
gagagtctggcgaggctcgtgcaggtgctcaagggcccggccggcgagaagcgtgtgccc
ttcatggccgatgcgctgcccgagggcttcgtcgcgcggcccgaggaattcgaccggctc
aagcgcagtctgctcgacgcgcgtggcgagcccgtagccatcactgcagcgctgcgtggc
gctggtggttacggcaagaccgcactcgccaacgcactgtgccatgacagcgacgttcag
gaggcgttcagcgacggcatcctgcgcattacgctgggcgagaagccggccgatctggtc
ggcagcatcgccgacctgatcgagaccctcgtcggcgaacgcccggcgttccgcgacatc
gaccccgccaaggtcgcgctcgtagacgcgctcgatgatcgccgctgcctgctggtgatc
gacgatgcctggcgtgccgaggacctggcgccgctcttgtatcgcggactgaggaaccag
accacgcggctcgtcacgacgcgcgacgatcgcgtcgtgccgcgggaggttccccgcatc
gccgtggacgcgatgcagtcgggggaagcgcaggccatgctgtcgcgcggaatgcccccg
gagacggcggcggcgctgcggccacggctcgcttcgctcgctggtcggctgggcgagtgg
ccgttggtgctcggcctggccaatggcgtagtgcggacccggatgtcgcgcggcgcgacc
gtcggcgatgcgcttgcctacgtcgaacgcgcgatcgtgcaccgcgggctcgcgcaggca
ttcacgcccgacgaacgcgcgtcccgacgccttaccgcctggggcaccttggaagttagc
ctcgagcaactccgcacagacgagcgcgcgcgcttcgcggaactcgcggtgttcgtcgag
gacgccgagattcccacgagcgtcgcgcttggcctgtggcggcagaccgcggcactcgat
ccactcgatggcgaggatctgctcgtgcgcctggccgacctgtcgttgttggtggaactc
gatctcggccgcggcgtgctgcgtctccacgacgtcgtgcgcaccctgctgcgcgacggg
ccgatcgcggggcgcctctcggagctcgaccgccttctggtgacgcactaccgagaggcc
aacgacggcgacctggcagcgctgagagatgtctacggcctacggcacctgatggcacat
ctgaacagcgcgggtgagctccaagtggcgcgggggctgctcaccgatccggcatggctc
gcgaacaagctgcaccgcctcggcatccagccgctccttgccgactacgccacgctatcg
catcgtgacgcgacgctggacctcgtccgcgggtcgctcagcttggctgctccggcgctc
gcgcgcaatgcaggcgagcttgcccagcaactcctcgcacgcctcgcgcctggagatgcc
aaggggttggacaagttcctcgcgcacacgcgacgtctgctcgtacgtcccaccttggtg
ccacaccgtccgaccttcacgccgcctggcgccgagctgcgccggtacgagggacatgaa
gagagtgtcaccagcgtgacagtcctggccgacgggcgacgcgcgctctcggggtctagg
gaccgcacgctgcgactctgggatctcgacaccggcgctgagctgcgccggtacgagggg
cattcggagtgggtcacgagcgtgaccgtgctggctgacggacgccgcgctctctcgggg
tattccgacggcgccctgcggctatgggatctggagaccggcgccgaactgcgacggttc
gagggccatgacaacgtggtcacgagcgcgaccgtgctggctgacggccgtcgcgctctc
tcggcatccgcggattggacgctgcggctctgggacctcgagagcggcgcgcagctgcac
cgctttgacgggcacgaagattgggtcgccagcgtggccgtgcacgaacgctacgtactc
tcggggtcctcggaccgtacgctgcgcctctgggatctcgagaccggcgttgagctacgt
cggttcgaggggcacgaaggcatggtcaccagcgtgacggtactggccggcgggggccgc
gcgctctcggggtcttgggaccgcacactccgactctgggacctcgagaccggcgccgag
ttgcgacggttcgcgggccatgacaacggggtcacgagcgtgaccgtgctggctgacggc
cgtcgcgcactctcggcatccgaggatcggacgctgcggctctgggatctcgacaccggc
gccgagctgcgccggttcgagagccatgcagggccggtcactagcgtcacggcgatggcc
gatgggcgccgcgcaatctcggcgtcctgggatcggacgctgcggctctgggatctcgag
gcaatgcccgagctgccacgctttggggagcacgaagacagggttagtagcctggcagtg
ctggccgacggccgtcgcgcactctcggggtcgtgggatcgcacgctgcggctgtgggat
ctcgagaccggcgttgagctacgtcggttagaggcgcaccagggcctcgttaccagcgtg
acagtcctggccgacggccgtcgcgcactctcggcatccgacgatcagacgctgcggctg
tgggatctggaaaccggcaccgaactgcggcggttcgaaggcgatgacaggggagggaac
tgcataacggtattgcctggcgggcgtagtgcacttcttcggactgacggtacgtttctg
tctgacggtacaacgctgctgctgtcggcactcgagaccggcgttgagctgcgtcggttc
gaggggcacgaaggtaaggtcaccagcgtagcggtgtcggccgacggacgccgcgctctc
tcggggtattccgacggcacactgcggctatgggatctggagaccggcgccgaactagga
cgtttcgggcagcatgaaggttgggtcacgagcgtgaccgtgctggctgacggccgtcgc
gcactctcggcatccgaggatcggacgctgcggctctgggatctcgacatgggtgtcgag
ctgcaccggtttgcgggacatagagcgtcgatcaacagcgtcacggtgctggctgacggc
cgccgcgcgctctccgcgtctgagacgttgcggctctgggatctcgagaccggcgttgag
ctacgtcggttcgaggggcacgaaggcatggtcaccagcgtgacggtactggccggcggg
ggccgcgcgctctcgacatccgacgatcagacgctgcgcctctgggatctcgagaccggc
gtcgagttggcgcgactgaccttcgatgccttgccatattcgctcgcgtggtcgtcgcag
cgaggcgccgccgtggtcggcgatgcccgcggacgcgtgcacgtgatcgacctcatcgaa
tga
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