Luteitalea pratensis: LuPra_04810
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Entry
LuPra_04810 CDS
T04394
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
abac
Luteitalea pratensis
Pathway
abac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LuPra_04810 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abac03019
]
LuPra_04810 (pnp)
03016 Transfer RNA biogenesis [BR:
abac03016
]
LuPra_04810 (pnp)
Enzymes [BR:
abac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LuPra_04810 (pnp)
Messenger RNA biogenesis [BR:
abac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LuPra_04810 (pnp)
Transfer RNA biogenesis [BR:
abac03016
]
Prokaryotic type
tRNA degradation factors
LuPra_04810 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
AMY11559
UniProt:
A0A143PUT5
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All DBs
Position
5715481..5717577
Genome browser
AA seq
698 aa
AA seq
DB search
MHTRSLELGNRALSFETGKLAKQADGSVLVRMGDTVVLVTACHAASPRVGIDFLPLTVDY
REFTYASGRIPGGFFKREGKPTEKEVLTSRLIDRPVRPLFPAGWAFETQIIAMVVSADTD
YDSDVLAVTGAGCALALSEMPFQKTIAGVRVGFVDGAYVINPTFAQRKASSLDLIIAGSA
DAVMMVEAGAQEVTEEQMVGALDAGHTAIKQIVATIDDLAKAAGKKKIVMPAKEANHDFY
REVEEKVYVPLSEAMRIKEKLESYGRVDQVLADLVASVPEAEVERRLEAKKIFKGLKEKV
LRDEILQRRHRLDGRKFDEIRAIWSEVTVLPRVHGSAVFTRGETQALVTATLGTADDQQK
IETMDGETYKRFMLHYNFPPFSVGETGFMRGPGRREVGHGALAERALTPVMPTEEQFPYT
VRVVSDILESNGSSSMASVCGGAMAMMDAGVPLRAPVAGVAMGLILDEGTGKFAVLTDIA
GAEDHYGDMDFKVAGTAAGITALQMDIKVSGITMEIMRQALAQARDGRLFILGKMAETLT
GPRAQTSQYAPRIVSIKIPVDKIRDVIGPGGKMIRSIIERTGVKIDVEDDGRVNVASNDE
ASAARALAIIQELTATPEIGKTYMGKVQRIADFGAFVEIMPGVDGLLHVSEIALHRVKDV
RDELKEGEQLLVKVLNVDPSGKIRLSRKALLQEEQPKA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacgtagtctcgagctcggcaaccgagctctttcgttcgaaaccggcaagctc
gcgaagcaggccgacggttcagtcctcgtccggatgggcgacacggtcgtgctcgtcacg
gcgtgccacgccgcgtccccgcgcgtcggcatcgacttcctgccgctgacggtggactac
cgcgagttcacctacgcgtcgggtcgcatccccggcggcttcttcaagcgcgaaggcaag
ccgaccgagaaggaagtgctcacgagccgcctgatcgatcggccggtccgtccgctcttc
ccggccggctgggcgttcgagacgcagatcatcgcgatggtcgtctcggccgacaccgac
tacgactcggacgtgctcgccgtgaccggtgccggttgcgccctcgcgctgtcagagatg
ccgttccagaagacgattgccggcgtccgcgtcggcttcgtggacggcgcgtacgtcatc
aacccgacgttcgcccagcgcaaggccagcagccttgacctgatcatcgccggcagcgcc
gacgccgtgatgatggtcgaggccggggcgcaggaagtgaccgaggagcagatggtgggc
gcgctcgatgccgggcacaccgccatcaagcagatcgtcgccaccatcgacgacctcgcc
aaggccgccggcaagaagaagatcgtcatgccggccaaggaggcgaaccacgacttctac
cgagaggtcgaggagaaggtgtacgtgccgctctccgaggcgatgcggatcaaggagaag
ctggagagctacggccgcgtcgaccaggtcctggccgacctggtcgcctcggtgcccgag
gccgaagtcgagcgccggctcgaggccaagaagattttcaagggcctgaaggagaaggtg
ctgcgcgacgagatcctgcagcgccgtcaccggctcgacggccgcaagttcgacgagatt
cgcgcgatctggtcggaagtgacggtgttgccgcgcgtccacggttcggcggtcttcacc
cgcggcgagacgcaggcgctggtcacggcgacactgggcaccgccgacgatcagcagaag
atcgagaccatggacggcgagacgtacaagcggttcatgctccactacaacttcccgccg
ttctcggtcggcgagacgggcttcatgcgcggcccgggccgtcgtgaagtcggccacggc
gcgctcgccgagcgggcgcttacgccggtgatgccgaccgaggagcagttcccctacacg
gtccgcgtcgtttcggacatcctcgagagtaacggctcctcgtcgatggccagcgtgtgc
ggcggcgcgatggcgatgatggacgcgggcgtgcccttgcgcgcgccggtggccggcgtg
gcgatgggcctgatcctcgacgaaggcaccggcaagttcgcggtcctgaccgacatcgct
ggcgccgaggatcactacggcgacatggacttcaaggtcgccggtaccgccgcgggcatc
accgcgctgcagatggacatcaaggtctccggcatcacgatggagatcatgcggcaggcg
ctcgcgcaggcgcgcgacggacgcctcttcattctcggcaagatggccgagacgctgacc
ggaccgcgtgcgcagacctcgcagtacgcgccgcgcatcgtgtcgatcaagatcccggtc
gacaagatccgtgacgtcatcggacccggcggcaagatgattcgcagcatcatcgaacgc
accggcgtgaagatcgacgtcgaggacgatggccgggtcaacgtggcgagcaacgacgag
gcctccgcggctcgagcgctggcgatcatccaggagctcaccgcgacgccggaaatcggc
aagacctacatgggcaaggtccagcgcatcgccgacttcggcgcgttcgtcgagatcatg
cccggtgtggacgggttgctgcacgtctccgagatcgccctgcaccgcgtcaaggacgtg
cgtgacgaactcaaggaaggcgaacaactcctcgtcaaggtcctcaacgtggatccttcg
ggcaagattcgcctgagccgcaaggccctgctccaggaagagcagccgaaggcgtaa
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