KEGG   Luteitalea pratensis: LuPra_05621
Entry
LuPra_05621       CDS       T04394                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
abac  Luteitalea pratensis
Brite
KEGG Orthology (KO) [BR:abac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abac03400]
    LuPra_05621
Enzymes [BR:abac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LuPra_05621
    5.6.2.6  RNA 3'-5' helicase
     LuPra_05621
DNA repair and recombination proteins [BR:abac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LuPra_05621
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 AbiEi_4 GntR DUF6406 NMB0537_N
Other DBs
NCBI-ProteinID: AMY12348
UniProt: A0A143PVX2
LinkDB
Position
6645865..6650547
AA seq 1560 aa
MAIVRDAPVLDLFHPVVARWFRDAFSAPTAPQAQGWPVIAGGSSTLLLAPTGSGKTLTGF
LWCVNRLMFEPAPDEMERCRVLYISPLKALAVDVERNLRAPLAGISRLAREEGVSHHLPQ
VAIRTGDTPAAERARFTRHPADILITTPESLYLLLTSNAREALRHIHTVIIDEIHAMVAT
KRGAHLALSLERLETIARVPIQRIGLSATQRPLDEVARFLAGAEPAPARSLQAAGCGLPE
GDIHEQFAATTDDPSYRPVAIVDAGRTRQLSLRIEVPVEDMARLTQVEAITSGPAAAGPQ
APSIWAAIHPRLLEVVLAHTSTLLFVNSRRLAERLAAAINELADETLVRAHHGSLAREQR
VEIEDALKAGRLRGLACTSSLELGIDMGAVDLVVQIEAPPSVASGLQRIGRAGHQVDATS
TGLIFPKYRGDLLACAAAVRAMREGRVEATHMPRNPLDVLAQQIVAMVAMDDWAVDDLFA
RVRQAAPFASLARPIFDGVLDMLSGRYPSDEFAELRPRLTWDRVAHRVTTREGAKRVAIA
NAGTIPDRGLYGVFLAGAPAGTARVGELDEEMVFESRVGETFLLGASSWRIEDISHDRVT
VSPAPGQPGKMPFWKGDGPGRPLEFGREIGALVRQLRRDSPDQARVRLEREHDLDALAAT
NLVQYLAEQIEATGAVPDDRTIVIERVRDELGDWRLCLLSPLGAQVLAPWAMAVSSRLRD
QFGLDVETMWADDGFVVRFPETDEPPDPQWLVPDADEVEALVIRQLGATSLFAARFRECA
GRALLLPRRRPGRRAPLWQQRKRAQDLLGVAAKYGSFPILLETYRECLRDVFDIPALAET
LRAVQSRQVRVVPVDTPTPSPFAASLLFGYVANYLYDGDAPLAERRAQALTIDQAQLQAL
LGSAELRDLLDADALDTLEAQLQCLPAEYRARTLDGVHDLLLRIGDLSTTQLRERVAADV
PPDAGDRLVRARRAVWLGVAGEQRLVATEDAARYRDALGVPLPQGLPDALLVAQPHALRD
LVSRYARTHGPFTTEEVAARYGLGRSTADLALKALQSEGRLLEGEFRPGGQQQEWCDSSV
LTAIRRRSLAKLRHDVEPVELPVLGRLLTQWQGVTRPRRGLDALLDVVETLQGLPLAASI
LEREILPARLERYQPSDLDTLISAGEVVWAGVEPLGERDGRIALFLTDHVGSLWRGVLQP
PSLEDLSAREQAILGALDARGALFFATLQEAAGGGFPQDTVDAIWSLVWRGLITNDTLQP
LRAQVGSVGREKRSRTASRPFRSRRVAPAAAEGRWTRLAPTVAANATGWSAAMGQQLLTR
YGVVTREVAGAEGLPGGFTAIHDVFRTLEESGRIRRGYFVSGVGAMQFAAPAAVDLLRAL
RTPPEAPEVAVLAATDPANPYGALVKWPESPDGAPGRGPTRSVGARVVLVDGHLTAWIAR
GMRALLVWLPEHDPERARHAEALARALPLTGTDREHRAASILLTEVNGSPSLDAPIRPFL
EAAGFVATSQGLQLRDVTGTSPAMPRLRRPDHWGPDTAVNDVPEVPDEAIAPISWPRRQR
NT seq 4683 nt   +upstreamnt  +downstreamnt
gtggcgatcgtgcgagacgcgcccgtcctggaccttttccaccctgtggttgctcgctgg
ttcagagatgcgttcagcgcgccgacggctccccaggcacagggctggccggtcatcgcg
ggtggatccagcacattgctgctggcgccgacgggcagcggcaagacgctgaccgggttc
ctctggtgcgtcaaccgcttgatgttcgagccggcgcccgacgagatggagcggtgccgc
gtcctctacatttcgccgctgaaggcgctggccgtcgatgtcgagcgcaacctgcgcgcg
ccactcgcgggcatcagccgtctcgctcgagaggagggcgtctcgcaccacctgccacag
gtggccatcaggacgggcgacacgcctgcggccgaacgcgcccgcttcacgcggcacccg
gccgacatcctgatcaccacccccgagtcgctgtacctgttgctgacgtcgaatgcgcgc
gaagcgctgcgccacatccacacggtcatcatcgacgagatccacgcgatggtggcgacc
aagcgcggcgcccatctcgccctgtcgctggagcgactggagacgattgcccgcgtgccc
atccagcgcatcgggctctcggcgacgcaacgtccactcgatgaggtcgcccggttcctt
gcgggcgctgagcccgcgcccgcgcgtagcctgcaggctgcaggctgcggcctgcccgag
ggcgacatccacgagcagttcgcggccaccaccgacgacccgtcatatcgccccgtggcg
atcgtcgatgcgggacgcacgcgacagctgtcgctgcggatcgaagtgccggtcgaggac
atggcgcggctgacacaggtcgaagcgatcacgagtggtcccgcggcggccggtccgcag
gcgccgtcgatctgggcggcgatccacccgcggttgctcgaggtggtgctcgcccacacg
tccacgctgctgttcgtgaacagccggcgcctcgccgaacgactcgccgctgccatcaac
gagctcgccgacgagacgctcgtgcgtgcgcatcacggctcgctggcgcgcgagcagcgc
gtcgagatcgaggacgcgctgaaggccggacgcttgcgcgggctggcctgcacgtcctcc
ctggaactcggcatcgacatgggcgccgtcgatctcgtggtgcagatcgaggctccgccg
tcggtggcgagcgggctgcagagaatcggccgtgcaggacaccaggtggatgccaccagt
accggcctcatcttcccgaagtaccgcggcgacctgctggcctgcgcggcagccgtgcgg
gcgatgcgcgaggggcgcgtcgaggccacgcacatgccgcgtaatccactcgacgtgctc
gcccagcagatcgtcgcgatggtcgcgatggacgactgggcggtggacgacctgttcgcg
cgggtacgccaggccgcgccgttcgcgtcgctcgcacgcccaatcttcgacggcgtgctg
gacatgctgtcggggcgatatccgtcggatgaattcgccgagctccggccgcgtctcacg
tgggatcgcgtcgcgcatcgcgtcacgacgcgcgaaggcgccaagcgagtggccatcgcg
aacgcgggcacgattcccgaccgtggtctttatggggtgttcctggctggcgcgcccgcg
ggcacggcgcgcgtcggcgaactcgacgaggagatggtgttcgagagccgcgtcggcgag
acgttcctgctcggcgcctcctcctggcgcatcgaggacatctcgcacgatcgcgtgacc
gtatcgccggcgcccggccagcccggcaagatgccgttctggaagggcgatggccccgga
cggccgctggagttcggtcgagaaatcggcgcgctcgtccggcaattgcggcgtgactcg
cccgaccaggcacgtgtcaggctcgaacgggaacacgacctcgacgcgctggctgcgacc
aatctcgtgcaatacctcgccgagcagatcgaggccaccggcgccgtacctgacgaccgc
acgatcgtcatcgaacgggtgcgcgacgaactcggcgactggaggttgtgcctgttgtcc
ccgctcggcgcccaggtactcgcgccgtgggccatggcggtgtcgtcgcgcctgcgcgac
cagttcggcctcgacgtcgagacgatgtgggccgatgacggattcgtcgtccgcttcccg
gaaacggacgaaccgccggacccgcagtggctcgtgcccgatgccgacgaggtcgaggcg
ctggtgattcgccagcttggcgcaacatcgctgtttgccgcgcggttccgcgaatgcgcg
gggcgagccctcctgctgccgcggcggcggccggggcgacgggcgccactgtggcagcag
cgcaagcgggcccaggacctgctcggcgtcgcggcgaagtacggctcgttcccgatcctg
ctcgagacgtatcgcgagtgcctgcgcgacgtgttcgacatccccgcgctcgcggagaca
ctgcgtgcggtgcagtcacgccaggtgcgtgtggtgccggtggacacgccgacgccgtca
cccttcgcggcctcgctgctgttcgggtatgtggccaattacctgtacgacggcgacgcg
cctctcgccgagcggcgggcacaggcgctgaccatcgaccaggcacaactgcaggcgctg
ctggggtcggccgagctgcgagaccttctcgacgccgacgcgctggacacgctcgaagcg
cagctgcaatgcctgcccgcagagtaccgtgcgcgcaccctggacggcgtgcacgacctg
ctgctccgcattggcgacctctcgaccacgcaactgcgcgaacgcgtggctgccgacgtc
ccgccggacgcaggggaccggttggtccgcgctcgtcgggcagtctggctcggcgtggcc
ggcgagcagcgcctcgtggcaaccgaggatgcggcgcggtatcgtgacgcgctcggtgtg
ccgctgccccagggactccctgacgccctgctggtcgcacagccgcacgcgttgcgcgat
ctcgtctcccgctacgctcgcacgcacgggccgttcacgaccgaggaggtcgccgcacgg
tacggcctcgggcgttcgacggccgatctcgccctcaaggcgctgcagtccgagggacgc
ctgctcgagggcgagttccgtccaggcgggcagcaacaggagtggtgcgacagctcggtg
ctgacggcgatccggcggcggtcgctcgcgaaactgcggcacgacgtcgagcccgtcgag
ttgccggtgctgggccggctgctgacgcaatggcagggcgtgacccgcccacgccgtggc
ctcgacgcgctgctcgacgtcgtcgagacactgcagggcctgccccttgcggcgtcgatt
ctcgagcgggagatcctccccgcacggcttgaacggtaccagccctccgacctggatacg
ctgatctccgccggtgaggtcgtgtgggcgggcgtcgagccgctcggcgagcgcgacgga
cgcatcgcgctcttcctcaccgaccacgtggggtcgctgtggcgtggcgtgctccagccg
ccctcgctggaggacctgtccgcacgcgagcaggcgatactcggtgcgctcgacgcgcgc
ggcgcgctgttcttcgccacgctgcaggaggcggccggcggcggcttcccgcaggacacc
gtcgatgccatctggagcctggtctggcgcggcctgatcaccaacgacacactgcagccg
ctgcgtgcgcaggtgggcagtgtcggacgcgagaagcgcagccggacggcgagccggccc
ttccggtcgcggcgcgtggctccggcggcggccgagggcagatggacccgactggcgccc
acggtcgcggcgaacgcgaccggctggagcgcggcgatgggtcagcaattgctgacgcgc
tacggcgtggtcactcgcgaagtagccggggccgagggattacccggcggcttcacggcc
atccacgacgtgttccggaccctcgaggagagcggtcgcatccgtcgcggctacttcgtg
agcggcgtcggcgccatgcagtttgcggcgccggccgcggtggacctgctgcgcgcgctg
cggacgccgccggaagcgcccgaagtggcggtgcttgccgctaccgacccggccaatccg
tacggcgccctcgtgaagtggccggagtcgcccgatggcgcaccgggtcgtgggcccacg
cgcagcgtcggcgcccgcgtcgtgctcgtcgatggccatctcacggcctggatcgcgcga
ggcatgcgggccctgctggtctggctacccgagcacgatccggaacgcgctcgtcacgcc
gaggctttggcccgcgcgctgccgctgactggcaccgatcgcgagcaccgtgccgcgtcg
attctcctcacggaggtgaatggcagcccctcgctcgacgcgccgatccgcccattcctg
gaggccgccggcttcgtggccacctcgcaaggcctgcaactgcgcgacgtgaccggcacc
tcccccgcgatgccgcgccttcgtcgccccgaccactggggcccggacaccgccgtgaac
gacgtccccgaggtgcccgatgaggcaatcgccccgatcagttggcctcgccggcagcgg
tga

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