Luteitalea pratensis: LuPra_06160
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Entry
LuPra_06160 CDS
T04394
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
abac
Luteitalea pratensis
Brite
KEGG Orthology (KO) [BR:
abac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abac03400
]
LuPra_06160 (sbcD)
DNA repair and recombination proteins [BR:
abac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LuPra_06160 (sbcD)
Archaeal homologous recombinant proteins
LuPra_06160 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AMY12876
UniProt:
A0A143PXA1
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All DBs
Position
complement(7288149..7289291)
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AA seq
380 aa
AA seq
DB search
MLDDLAVAVERERIDLVLMTGDVFDVASPSAEAERLVFRFFRRVGQLDVPSVVIAGNHDS
PARVEAWGQLAELAQVTACGVVKPHDQGGCVTIPTRSGEPAVVAMLPFVGPSQFLSAQEL
GVAGGEAVGAYARHMQRLVADITRGFRADAVNLLMSHTHMEGAVVGTSERRVHVAEAWAA
TVDMLPATAHYVALGHIHRNQAIAAAPVPTWYAGAPMQLDFGEEGEVKAYNIVEVHPDEP
ARVTARPYVGARPLRTVTVLASMFEGDSIASASTPSLQFDEPRVDVSERPHLRVIVDCTA
GAVDPDINRKVRAVIPGVVSVDLLRPRPVPGDTQPVLQGMFAPRDLYAAYLHHQGQRGTE
AMLGAFDALYQASLVGEDEA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgatctcgccgtggcggtcgagcgcgagcggatcgatctcgtcctgatgacc
ggggacgtcttcgacgtcgcgtcgccgtcggccgaggccgagcggctcgtcttccgattc
ttccgccgcgtcggccagctcgacgtgccgtcggtggtgatcgccggcaaccacgacagc
cccgcacgggtcgaggcgtgggggcaactcgccgaactggcgcaggtgacggcctgcggc
gtggtgaagccgcacgaccagggcgggtgcgtcaccattcccacgcgctcgggcgagcca
gcggtcgtcgcgatgctgccgttcgttgggccgtcgcagttcctgtcggcccaggagctt
ggcgtggccggtggtgaggcagttggcgcgtacgctcgccacatgcaacggctcgttgcc
gacatcactcgcggcttccgggccgatgcggtgaacctcctgatgtcgcacacgcacatg
gagggcgcggttgtcggcacgagcgagcgtcgcgtccacgtggccgaagcatgggcggcg
accgtggacatgctgcctgccactgcgcactacgttgcgctcggccacatccatcgcaac
caggccatcgctgccgcgccggtgccgacatggtatgcgggcgcgccgatgcagctggat
ttcggcgaagagggcgaggtcaaggcgtacaacatcgtcgaggttcatcccgacgaaccc
gcgcgcgtgaccgcacgcccctacgtcggcgcacgaccccttcgcacggtgaccgtcctc
gcgtcgatgttcgaaggagattcgattgcctccgcgtcgacgccctcactgcagttcgac
gaaccacgcgtggacgtctcggagcggccgcacctgcgcgtgattgtcgattgcaccgcc
ggagcggtcgatcccgacatcaaccgcaaggtgcgggccgtcatccccggcgtcgtcagc
gtggatctgctgcggcctcggcccgtccctggcgacacccagccggtactgcagggaatg
ttcgccccgcgtgacctctatgcggcctacctgcaccaccagggccagaggggcaccgag
gccatgctcggcgcgttcgacgccctgtaccaggcttcgctcgtcggcgaggacgaggca
tga
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