Acinetobacter baumannii D1279779: ABD1_08450
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Entry
ABD1_08450 CDS
T02491
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
abad
Acinetobacter baumannii D1279779
Brite
KEGG Orthology (KO) [BR:
abad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abad03400
]
ABD1_08450 (sbcC)
DNA repair and recombination proteins [BR:
abad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABD1_08450 (sbcC)
Archaeal homologous recombinant proteins
ABD1_08450 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
Seryl_tRNA_N
SMC_N
FtsK_SpoIIIE
ABC_tran
AAA_22
MMR_HSR1
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGH34735
LinkDB
All DBs
Position
complement(939542..943138)
Genome browser
AA seq
1198 aa
AA seq
DB search
MKILSIRIKNLASLADEHFIDFESEPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR
LKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPN
GKLQSVQRHLKCLTDGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARD
SERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQ
QAEQNYQQLEQQKHVLDKQQQWFERKAKLEQEVQSKQQQFQTQQNHHQQLASEREQLKRL
EVFSEIRPQVFQQAQNLQTLQQLEPQIQQAQTKFNELVQIFETGQKQYQLAEQQLKQTLD
FEQQHQQALNQVRQSIQERAFIADEYKKCKEKRHVLEQKLSPLQQQQNAVQQQIAQLEQN
KIHLQQQLIQTQQYAELDKGLSAHLHQLGQFIQNYQTIEEQLGNPTLARQKLSEAKSELE
QLTASLGTVEQIELKLEQQRKDKDQKLAQVTQLDLIQQKIKIYHELYAELQQFTEKHTQA
SAQEEQLKTVCQLAEQDYQTAKTEREKLQHILQQQRLLHTKNIEQLRANLKEGEACLVCG
STHHPYRIDDSAVSKALFDLQQQQEQQAIALEQTKFNAWQTQQHALTQCRAELEQVQKYL
AQLQVKQTHLQQELEQAFNLNQLHIELNQAPEQILQTLNELRQAAQTAISSFDSENLRLT
QAIKQHNQLVQTIQRNESLLNTAQQWQQQVQHIVECLSETEQHAWQQASSQTAKQTWAIL
DARAKQLEQQEQLSQRFEQQQQELKMLSASLEQMTKQIDEIDQNLQEITLKGQQNNEKAV
SLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTRQHFEQQKQALDQLKHQY
QHTEQHQQQLDGQIQNWLKAHTDFQASDLTALIQINSAQEQDIRNRLNHAERLLSEASSA
LKTMQEQLSEHLQTQPDIEYEKLVILIQDNIAKLKAQLEVRDGLKLKLELHQQNLAKQQK
YAEQIQNIQQEEHRWSKISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLK
RLDQSLSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEGF
GTLDASSLHMVMNALDQLQNQGRQVILISHIQEMHERIPVQIQVKPLGAGASTIEIVG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttatccattcgaataaaaaatctggcatcgcttgctgatgaacattttatt
gactttgaaagcgaacctctggcccatgcaggtctcattgcaattgtggggaaaactggc
gcaggtaaatcgaccattttagatgccatgtgtctggctttgtttaatcgggttcctcgc
cttaaagacagcgatggcaaattaaaagatgttgatggttccgagttactgaccaattcg
cctttaactgttttacgccgtggtacaggacatggttttgctgagctttgctttattgcg
caagatcaaaagcgctatttggctcgttgggaaattaaacgtgcacgtgaaaacccaaat
ggtaaattacaaagtgtgcagcgccacttaaaatgcttaaccgatggcgttgtgcttgcc
gataaagccaaagcggttgatgaaaaagttaagcaaattacccagctttcttttgaacag
tttactcgtgcggtgctacttgcccagtccgaagtgaccgcatttttaaaagctcgagac
agcgaacgtggtgaattacttgagtacctgaccaactccagcattttcgccaaaatcggt
gaactggcttttcgtaaaacagccgatattgcaaagcagcgtaaacagctggaagagttt
ttaggccatattgaaattttgtctgatgaagagattgctgcatttaccgagcaataccag
caagccgaacaaaactatcaacagttagaacaacaaaaacatgtcttagacaaacagcaa
caatggtttgaacgcaaagcaaaacttgagcaagaagttcaatcgaaacagcaacagttt
caaacccagcaaaatcaccatcaacaactggctagtgaacgtgagcaattaaaacgactc
gaagttttctctgaaatacgcccacaagtttttcagcaagctcaaaatttacagacccta
caacaacttgaaccgcaaattcagcaagctcaaaccaagtttaatgagttggtacaaatt
tttgaaacgggacaaaaacaatatcaacttgcagaacaacagctcaaacagaccctcgat
tttgaacaacagcatcaacaagctttaaatcaagttcggcagtccattcaagaacgtgct
tttattgccgatgaatataaaaagtgcaaagaaaaaagacatgtacttgagcaaaaacta
agcccactacaacagcagcaaaacgctgtacaacagcagattgcacagcttgagcagaac
aaaattcatctacaacagcagctgatccagactcagcaatatgctgaattagataagggc
ctttcagcacatctacatcagcttggacaatttattcaaaattaccaaacgattgaagaa
cagctcggtaaccctacccttgctcgccaaaagctatcggaagctaaaagtgaactcgaa
caactcacagcttcactaggcaccgttgaacagattgagttaaagcttgaacaacagcgt
aaagataaagatcagaaacttgctcaagtcacgcagttagatctgattcaacagaaaata
aaaatttatcatgagctatatgctgagcttcagcaattcaccgaaaaacatactcaagcc
tccgcgcaagaagagcaacttaaaaccgtttgccagttagctgaacaagactaccaaaca
gcaaaaactgaacgtgaaaagttacagcacatcctgcaacagcaacgtttactacacacc
aaaaatattgaacagttacgggccaatcttaaagaaggtgaagcgtgtttggtctgtgga
agcacccaccatccttatcgtattgatgacagtgcagtctccaaggccttgttcgattta
cagcaacagcaagagcaacaagctattgcactcgaacaaactaagtttaatgcatggcaa
acccagcaacatgcacttactcagtgccgggccgagcttgaacaagttcagaaatatcta
gctcaactgcaagtaaaacagacacacttacagcaagaacttgagcaagcgtttaacctc
aatcaattacacattgagcttaatcaagctcctgaacaaatcttacaaacacttaatgag
cttagacaagctgcgcaaactgccataagttcatttgactcagaaaacttgcgtttaacc
caagccattaaacaacacaatcaacttgttcaaactattcagcgtaatgaaagtttgctt
aatacagcacagcaatggcaacaacaagttcaacatattgtcgagtgtttatcggaaacc
gaacagcacgcatggcagcaagcaagtagccaaacagctaagcagacttgggctattctt
gatgcacgtgctaagcaacttgaacaacaagaacagctttcacagcgttttgaacaacag
cagcaagaacttaaaatgctgtctgctagccttgagcaaatgaccaagcaaattgatgag
atcgatcaaaatctccaagagattacgcttaaaggccaacaaaataatgaaaaagcggta
tcgctcattcagcaaatgacgggccgttcggatattaagccgcatgaatggttaattgag
catgacgctaaacgtcagcaccaacaaacggcgtatcatgaggctaaacaacgtttcgaa
caaaccagacaacactttgagcagcaaaaacaggcgctcgatcaacttaaacatcagtat
caacacacagaacaacatcaacagcagcttgatgggcaaattcaaaactggttaaaagcc
catactgattttcaggcatctgatcttacagcactcatacagattaattcagctcaagag
caagatattcgtaaccgtcttaatcatgccgagcgtttattaagtgaagcctcttctgcc
cttaaaacgatgcaagagcaattaagcgagcacttacaaactcagccagatattgaatac
gaaaagctcgttatcctcattcaagacaatattgcaaagctcaaagcacagcttgaagtg
cgtgacgggctaaagctgaagcttgaattacatcagcaaaaccttgccaaacagcaaaaa
tacgctgagcaaattcaaaacattcaacaagaagaacatcgctggagcaaaatttcaggc
ttgattggtgatgccaaaggtaaagagttccgtgactatgctcagcaatatcacctagat
attttagttgaacatgccaaccaacaactggcgatgctttctcagcgttatacgctaaaa
cgtcttgatcagtccttaagccttgccattattgaccacgacatggatggagaaacccgc
tcagttgcctctttatctggcggtgagtcgttcttaactgcccttgccttgtctttagcg
attgccaatatggcatcgggttcaatgaaaattgaatcactgtttattgatgaaggtttt
ggtactttagatgcctcatctttgcacatggtcatgaatgctttagaccaactgcaaaat
cagggacgtcaggtcattctcatctcacacattcaagaaatgcatgaacgcattcctgta
caaattcaagtgaaaccacttggtgctggtgcaagtaccattgaaatagtgggttaa
DBGET
integrated database retrieval system
