Acinetobacter baumannii D1279779: ABD1_27840
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Entry
ABD1_27840 CDS
T02491
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
abad
Acinetobacter baumannii D1279779
Brite
KEGG Orthology (KO) [BR:
abad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abad03016
]
ABD1_27840
Enzymes [BR:
abad01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABD1_27840
Transfer RNA biogenesis [BR:
abad03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABD1_27840
Prokaryotic type
tRNA splicing ligases
ABD1_27840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AGH36668
LinkDB
All DBs
Position
3041389..3042594
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AA seq
401 aa
AA seq
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MGIQKILNEEAQYGVPVKIFTQDIDNESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFEATWQKQLGTLGGGNHFIELCIDENQDIWV
MLHSGSRGFGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSQSFNDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSQETHFGENLFVTRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVIANQAELIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaagatattaaacgaagaggcacaatatggtgtccccgttaaaattttc
actcaagacatagataatgaaagtattgaacaactcaagaaaatggcacaactgcaattt
atatattctcatattgctgttatgcctgatgtgcatgttggaaaaggtgcaactgtaggc
agcgtcattcctactaaacatgccattattccagctgcagtgggagtagatattggctgt
ggaatgaatgctattcgtttgagcctgaaagcttcacaacttccagataacttaagccgc
ttgcgggacgccattgaacggaaagtgccggttggatttgctttgcacaaacaagtcaaa
gcaaaagcttctagcattattccacttgaaaaacgcttagaacctattattaaaaagcat
ccgggtcttgtccgaatgcttcgtcagtttgaggcaacatggcaaaaacagttgggcact
ttaggcggcggtaatcactttatagagttatgtattgatgaaaatcaagatatatgggtg
atgctccattcgggcagccgaggttttggtaacgtcataggtacttattttattgagtta
gccaagaaagaggcacaacatcgctttgggcacgtgcctgataaagatttaagttatttt
gctgaaggctcgcaaagctttaatgattatgtagaagccgtagagtgggctcaagaatat
gcttttgaaaatcgtaaagaaatgatgcgattaatattagaagcaattcgccctcttcta
ccttcttttcaaatgacgaaagaagcaatcaattgtcaccataactatgtgagtcaagaa
acacactttggtgaaaacctttttgttacaagaaaaggggcaattcgagcaggtttagat
gagttaggaattattccaggttctatgggagcacgctcgtatattgttaaaggtaaagca
aaccctgaatctttttgttcctgttctcatggagctggccgcaaaatgagccgaagcaaa
gcaaaagttctttttaatcagcaggacttgattgaacaaacacaagggattgaatgccgt
aaagacagtggtgtagtcgatgaaattccaagtgcctataaagatattgatgaggttata
gccaatcaagcagagctcattgaagtcgttcatactcttaaacaagttttatgtattaaa
ggttaa
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