Suicoccus acidiformans: CL176_05100
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Entry
CL176_05100 CDS
T05652
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abae
Suicoccus acidiformans
Pathway
abae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CL176_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abae03400
]
CL176_05100
Enzymes [BR:
abae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CL176_05100
DNA repair and recombination proteins [BR:
abae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CL176_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA_28
RsgA_GTPase
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_12
UvrD_C
NPHP3_N
AAA_16
cobW
AAA_29
AAA
T2SSE
MMR_HSR1
WipA_Phos
Motif
Other DBs
NCBI-ProteinID:
AXY25426
UniProt:
A0A347WK19
LinkDB
All DBs
Position
1080161..1082734
Genome browser
AA seq
857 aa
AA seq
DB search
MSETIESLIVGDVEAIYFENPNNLYKVVRINVDQEESDLIIGDSIVITGQFATLHVDTTY
EFYGHLTNHPKYGEQFAVERYQQVALTSEFGLVEYLSSNRFKGVGTVIAQRVVDKLGMQA
IECIIADATALDGITGLSKKVADNLRRQVIEHQGTEQVIMKLNEWGFGPSLSEKIYQIYG
SGAIEVIQENPFDLVEQVEGIGFNKADQLAEKLGMEADAQERLIAGLFATVSEISNSNGD
TCVEEALLLQEAQKLLEKSRPFMIDEASLNQALESALQKETLFRIDTGVMIPSLYYAELG
IVHYIDQYLTYEQIERFEQAEIAAAIEAVEAELAITYDATQKEALKTAIDSPMSVITGGP
GTGKTTLINGLIHMHAILHEYDLEEVSAKPDKNPILLAAPTGRASKRMQETTGMPATTIH
RLIGFTRESVVEEFSATQLEGSLLIVDEMSMVDTWLMHWLLQAVPYELQVIFVGDRDQLP
SVGPGKVFNDLIASRMIPSISLTKIYRQARDSSIIQLAHAVRQGQLPGDFLAKKHDRTFI
QATSEQIGPAVKQIVEHAVKKGFDANNLQVLAPMYRGPAGINALNELLQELLNPPRTRRR
ELQYFDTVFRVGDKVLQLVNNTEEGVYNGDIGRIEAIFYKKETESKQDELVVSFDEKELT
YLRGDLDQLALAYCMSIHKSQGSEYDLVILPLIDLYSRLLRKDVLYTAITRAQKSLILIG
NPESFHKAVHQQQSERQTFLGELLQVKASERNPDYQTAVAKASEKPKQTKQDKLPESAKS
PDEALETDPKLSQVGTGDKVLGAVPGVTVVAQEASSEPSMEEPPSDIPKVLTPDNYLQID
PLIGMHDISPYDFMVET
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacaatcgaatcattaattgtcggcgatgttgaagcgatttatttcgaaaat
cctaataatctttacaaggtcgtccgaattaatgtggaccaggaagagtctgacttaatc
atcggcgactcaattgtcatcactgggcaatttgctacattgcatgtggatacgacttat
gaattctatggtcatttgaccaatcaccctaaatatggtgaacagtttgcggttgaacgc
taccaacaggtcgctttaacgagcgaatttggcttggtggaatatttatccagtaatcgc
tttaaaggggtcgggacggttatcgctcagcgcgtcgttgataaattagggatgcaggcc
attgagtgtattattgcggatgctacagctttagatggtatcaccggcttatccaagaaa
gttgcggacaatttgcggcggcaagtgattgaacatcaaggtacggagcaagtgattatg
aagctcaatgagtggggctttggtccgtctttatctgagaagatttatcaaatttatggc
agtggtgctattgaagttattcaggagaatccttttgatttggttgagcaagtcgaaggt
attggcttcaataaagcggatcaattagctgaaaagctcggcatggaggcggatgctcag
gaacgcttgattgcgggtttgtttgcaacggtcagtgagatttctaacagtaacggcgat
acttgtgttgaagaggccttgctcttacaagaagcgcaaaagcttttggagaagagtcga
ccgtttatgattgatgaagcaagcctgaatcaagcgctggaaagtgcgttgcagaaagaa
acgctttttcgtattgatacaggggtcatgattcctagtctgtattacgctgaactggga
atagtgcattatattgatcagtatttgacctatgagcagattgagcgttttgagcaggcg
gagattgctgctgcgattgaagcagttgaagcggaattagcgattacttatgatgcgaca
cagaaagaagcgctcaaaacagcgattgactctcctatgtccgtcattaccgggggacca
gggacggggaagacgacgttgattaatggcttaattcatatgcatgcgattctgcatgag
tatgatttggaagaagtttctgctaagccggataagaatccgatacttctggcagcgcca
actggacgtgcgtcaaaacgcatgcaggagacgactggcatgccggccacgacgattcat
cgtctgattggctttacccgggagagtgtggttgaagaattctctgccacacagctggaa
gggagtctcttaattgtcgatgagatgtcgatggtggatacgtggctcatgcactggctt
ttgcaggccgtaccctatgaattgcaagtcatctttgtcggtgaccgcgatcagttacca
tcggttggtccggggaaagtctttaatgatttaatcgcttcacggatgattccctccatt
tccttgactaagatatatcgccaagcgcgagatagttctattattcagctggctcatgct
gtgcggcaagggcaattgcctggtgatttccttgccaaaaagcatgaccgcacctttatt
caagcaactagtgagcaaattggacctgcggtcaagcagatagttgaacatgctgtgaag
aaaggttttgatgcgaataatttgcaggttttagcacctatgtaccggggacctgctggg
attaatgccttgaatgaattattacaagaactcctcaatccgcctcgaacaagacggcgc
gagctacaatatttcgacacagtgtttcgggtgggggataaggtactgcaattggtcaac
aatacggaagaaggcgtatataacggggatattgggcggattgaagctattttctacaag
aaggagacggaatcaaagcaagatgaactggttgtgtcctttgatgagaaggagctgacg
tatttacgcggtgatttggatcaattagctcttgcttattgcatgtcaattcacaagtcc
caagggagtgagtatgatctagtaatattaccactgattgacttatattcgcgcttactg
cgcaaggatgtcctttataccgccattacacgcgctcagaaaagcttgattcttatcggc
aatcctgaaagtttccataaggcagtccatcagcagcaaagtgagcggcagactttctta
ggggaattgttgcaggttaaggcaagtgagcgtaatccggattaccaaaccgcagtggcc
aaggcttctgagaagcctaagcaaactaagcaggataagctccctgaaagcgcaaagagt
ccagacgaggcgctggaaactgacccgaaactgagtcaagtggggacaggagataaggta
ctgggtgcagttcctggtgtgaccgtagtcgctcaagaagcaagcagtgaaccgtcaatg
gaagaaccaccaagcgatatacctaaggttttaacgcctgacaattatttacaaatcgac
ccactgattgggatgcacgatattagcccttatgactttatggtcgaaacctaa
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