Suicoccus acidiformans: CL176_05960
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Entry
CL176_05960 CDS
T05652
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abae
Suicoccus acidiformans
Brite
KEGG Orthology (KO) [BR:
abae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abae03032
]
CL176_05960
03400 DNA repair and recombination proteins [BR:
abae03400
]
CL176_05960
Enzymes [BR:
abae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CL176_05960
DNA replication proteins [BR:
abae03032
]
Prokaryotic type
DNA Topoisomerases
CL176_05960
DNA repair and recombination proteins [BR:
abae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CL176_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
HypA
Toprim_4
Toprim_2
Zn_ribbon_IS1595
IBR
Toprim_C_rpt
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AXY25574
UniProt:
A0A347WKG7
LinkDB
All DBs
Position
complement(1260896..1262959)
Genome browser
AA seq
687 aa
AA seq
DB search
MAYKNLVIVESPTKAKTIGRYLGRNYKVVASKGHLRDLPKSKMGVDIENNFEPHYITIRG
KGDTVKELRKLANKAENVYLAADPDREGEAIAWHLSHLLKLDPDAENRVVFNEITKDTVK
EAFKEPRKIDMDLVDAQQARRILDRVVGYSISPLLWKKIKGGLSAGRVQSVALKLIIDRE
KEIRNFKPEEYWTIPTKFKKGRSKFEADFYGLSGKKLKLENEAAVKDIMDRIDTNATFTV
KDIVEKERRRKPYAPFTTSTMQQEASNRLNFRAGKTMMVAQQLYEGVAIGGGTVGLITYM
RTDSTRISPTARQAAATYIEDTYGKNFLGAGQRGKASAGSQDAHEAIRPSDVTITPESIK
DKLSKDQFRLYALIWARFVASQMTDAVFDTIRADIEQNDVTFRANGQRIKFEGYMKVYKP
AQSSKDNYLPDLSVGDDVKIDTIEPTQHFTQPPARYNEASLVKTMEELGIGRPSTYAPTL
ETLRKRYYVKMVAKRFEPTELGEIVNNVMEEFFPQIVNVEFTAGLEDELDDIEEGKRMWV
SVLDEFYSSFAKDLDKAEEGMEKIEIKDEPAGFDCPECGKPMVIKIGRYGKFYACSGFPD
CRHTEAIVKKIGVTCPTCGKGEVVERKSKKNRIFYGCDRYPECDFASWDKPVGRNCPKCD
HYLIEKTSRKGSQVKCSNCDYEEDLVQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttggcatataagaacttagtcattgttgagtcgccaacaaaagctaaaacaatcggccgt
tatcttggccggaattataaggtggttgccagcaaggggcacttgcgtgatttacctaaa
agtaagatgggtgtcgatatcgagaataatttcgagcctcattacatcaccattcgtggt
aaaggggatactgtcaaagaactgcgcaagcttgccaataaggccgagaatgtctaccta
gcagccgacccggaccgcgagggagaagccattgcttggcatttaagtcatctgctgaaa
ctagaccccgatgcagaaaatcgcgtcgtctttaatgaaattacgaaggatacggtcaaa
gaggccttcaaagagccacgcaaaattgacatggatctagtcgatgcccaacaagcacgg
cggattctagaccgggttgtcggctactcgatctcgcctttgctctggaagaaaatcaaa
ggaggcctcagcgccggccgggtccaatccgtcgctttaaaattaatcattgaccgcgaa
aaggaaattcgcaatttcaagcctgaagaatattggaccattccaacgaagtttaagaag
ggccgttcgaaatttgaggcagacttttacggcttgtcaggcaagaagttgaaactcgag
aatgaagcggcggtcaaagacattatggaccgcatcgatacgaatgcgacctttaccgtc
aaagatatcgtggagaaagagcgtcgccgtaaaccttatgcaccttttacaacgagtacg
atgcaacaggaagcatcgaatcgccttaacttccgagctggtaagaccatgatggtcgcc
caacagctttacgaaggggttgcgattgggggcggaacggttggtttgattacctacatg
cgtaccgactccacccgtatttcgccaacagcgcgccaagcagctgcgacgtacattgaa
gatacttacggcaagaactttctcggtgccggtcaacgcggtaaagcgagtgctggctca
caggacgcccacgaggcaattcgcccatcggatgtgacaattacaccggaatcgattaaa
gataagttgagcaaagatcaattccgcttatatgcacttatttgggcccgttttgttgct
agtcagatgactgatgcggtttttgatactattcgggcagacattgaacaaaacgatgta
accttccgtgcgaatggccaacgcataaagtttgaaggctatatgaaggtgtataagccg
gcacaatcgagtaaagataattacttacccgatttatccgtgggagacgatgttaaaatt
gacaccattgagcctacccagcactttacccagccaccagcccgctacaatgaagcaagc
ttggttaaaacgatggaagaattaggtattggtcgaccgtctacttacgcaccaacctta
gaaactctgcgcaagcgctactacgtcaagatggttgctaaacgtttcgaaccgacggaa
ttaggggaaattgtcaataatgtcatggaagaattcttccctcaaattgtcaacgtcgaa
tttacggccggtcttgaagatgaacttgacgacatcgaagaaggcaaacgcatgtgggtc
tccgtcttagatgaattctactcaagtttcgccaaggatttggataaggcagaagagggc
atggagaagattgaaattaaggatgaaccagctggctttgactgtcctgagtgcggtaag
cccatggtcatcaaaattggtcgctacggcaaattctatgcatgtagtggcttcccggat
tgccgccatacggaagctatcgtcaagaaaatcggcgtgacctgcccaacctgtggcaaa
ggggaagtcgtcgagcgcaagtcgaagaagaaccgtatcttctatggctgcgatcgctat
cctgaatgtgatttcgcttcctgggataaacctgtgggccgtaattgtccgaaatgtgat
cactatctcattgagaagaccagtcgcaaaggtagccaggtgaaatgtagtaactgtgac
tacgaagaagacctcgttcaatag
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