Suicoccus acidiformans: CL176_06240
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Entry
CL176_06240 CDS
T05652
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
abae
Suicoccus acidiformans
Pathway
abae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CL176_06240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abae03019
]
CL176_06240 (pnp)
03016 Transfer RNA biogenesis [BR:
abae03016
]
CL176_06240 (pnp)
Enzymes [BR:
abae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CL176_06240 (pnp)
Messenger RNA biogenesis [BR:
abae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CL176_06240 (pnp)
Transfer RNA biogenesis [BR:
abae03016
]
Prokaryotic type
tRNA degradation factors
CL176_06240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
S1_RRP5
OB_RRP5_4th
GGDEF
DUF3294
Motif
Other DBs
NCBI-ProteinID:
AXY25626
UniProt:
A0A347WKL9
LinkDB
All DBs
Position
complement(1317778..1319874)
Genome browser
AA seq
698 aa
AA seq
DB search
MEKQVFETTLGGRPLSVEIGQMARQANGAALIRYGDTVVLSTAVASKKATSFDFFPLTVN
YEEKMYSVGKIPGGFIKREGRPSEAATLTARLIDRPIRPMFPEGVRNEIQIVNTVLSVEH
DCAPDVTAMFGSSLALAYSDIPFDGPIAGVHVGRVNGELIINPTPEQAEQSDIDLTVAGT
ATAINMVESSAKIVKEEDMLQALLFGHEAIKGLVAFQNKIVAQIGKEKFELTISETNPDI
QAQVDAMYKEPMIDAIQTPEKKAREEAIADVMQGAMAYFEEKYLDAADLADILKSANQAL
QDLEKNEVRRLITKENVRPDGRKVDEIRPLASEVGLLPRVHGSALFTRGQTQALTSVTLA
PLGEYQVIDGLGTEEGKRFIHHYNFPPYSVGETGRMGSPGRREIGHGALGERAMAQVIPE
PEDFPYTIRLVSEILESNGSSSQASITAGSLAMMDAGIPIKAPVAGIAMGLVMDGEDYTV
LTDIQGLEDALGDMDFKVAGTSEGITALQMDIKIQGITEQILTEALEQAKKARLEILDHM
ATTLEAPREELSPYAPKIEMMTIDPDQIKVVIGKGGETINKIIDETGVKIDIDEDGNVSI
ASSDQAMINRAREIITNLTKVVEVGEVYDGVVKRIEKYGAFVEILPKQDGLLHISELENH
RVNKVEDILSLNDTVKVKVIEIDDRGRINLSRKVLLED
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagtatttgaaacgacactcggtggccgtccactaagtgtagaaattggc
caaatggcccgccaagccaatggggccgctttaattcgctatggggacactgttgtctta
tcaacggctgttgcctcaaagaaagcaacgagctttgacttcttcccactgacagtgaac
tatgaagagaagatgtactcggttgggaaaatccctggtggctttattaaacgggaaggc
cgtccttcagaagcagcaaccttaactgctcgcttaattgaccgtccaattcgtccaatg
ttcccagaaggcgtgcgcaatgaaattcaaatcgttaacacagtcttatcggtcgaacat
gactgtgcgcctgacgtgacggccatgtttggttcgtccttagcccttgcttattccgac
attccttttgacggtccgattgctggcgtacacgtcggtcgagtgaatggcgaactgatt
atcaacccaacgccggaacaagcggagcaatctgatatcgacttaaccgttgccggaact
gcgacagctattaatatggttgaaagttctgctaaaattgtcaaagaagaagacatgctc
caagcacttctattcggtcatgaagccattaaaggactcgtcgccttccagaataagatt
gttgcacaaattggtaaagagaaattcgaactcactattagtgaaaccaatccagacatc
caagcccaagtggacgcaatgtataaagaaccgatgattgacgcgattcaaacaccagag
aagaaagctcgtgaagaagcgattgcggatgttatgcaaggggccatggcttatttcgaa
gagaagtatttagatgcagcggatttagccgacatcttaaagtcagctaaccaagcctta
caagatttagagaagaacgaagtacgtcgcttaattacgaaggaaaatgtgcgtccagac
ggccgtaaagtcgatgaaattcgaccacttgcttcagaagttggcttgctcccacgggtt
catggttcagccttattcacacgtggtcaaactcaagcgttaacttccgttaccttggca
ccccttggtgaataccaagttatcgatggactaggtactgaagaaggcaagcgtttcatc
catcactacaacttcccaccgtattccgttggggaaaccggtcggatgggtagcccaggc
cgtcgggaaattggtcacggagccctcggtgaacgggccatggcacaagtaattccggaa
ccagaagacttcccatacacgattcgcctcgtatcagagattcttgaatccaacggctcc
tcttcgcaagccagtattactgcaggtagtttggcgatgatggatgcgggtattccaatt
aaggcacccgttgcagggattgcgatgggccttgtcatggacggagaagactatactgtc
ttaacagatattcagggcttagaagatgccctcggcgatatggactttaaagtagccgga
acatccgaaggaatcaccgccttacaaatggacatcaaaatccaaggcatcactgaacaa
atccttaccgaagcccttgaacaagccaaaaaagcgcgcttagaaattctagaccatatg
gcaacaacccttgaagctccacgcgaagagttaagtccatacgcaccgaagattgaaatg
atgaccatcgatccagaccaaattaaggttgtcatcggtaaaggtggtgaaaccatcaat
aagattatcgacgaaaccggcgttaagattgatattgatgaagatggtaatgtatccatc
gcctccagcgaccaagcgatgattaaccgcgcccgcgaaattataacaaacttaaccaaa
gtagttgaagtcggtgaagtttatgacggcgtggttaaacggattgagaaatacggagct
ttcgttgaaatcttaccgaaacaagacggactcctccatatttcagaattagaaaatcac
cgcgtgaataaagtagaagacatcttaagcttgaacgatacagtaaaagtcaaagttatt
gaaattgatgaccggggacgcattaacttatcacgcaaagtgttattagaagattaa
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