Suicoccus acidiformans: CL176_07750
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Entry
CL176_07750 CDS
T05652
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
abae
Suicoccus acidiformans
Brite
KEGG Orthology (KO) [BR:
abae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abae03019
]
CL176_07750
03009 Ribosome biogenesis [BR:
abae03009
]
CL176_07750
Enzymes [BR:
abae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CL176_07750
Messenger RNA biogenesis [BR:
abae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CL176_07750
Ribosome biogenesis [BR:
abae03009
]
Prokaryotic type
rRNA helicases
CL176_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_RecD
CMS1
MGS
DUF724
Motif
Other DBs
NCBI-ProteinID:
AXY25900
UniProt:
A0A347WLE3
LinkDB
All DBs
Position
complement(1658751..1660106)
Genome browser
AA seq
451 aa
AA seq
DB search
MKFTELPLAPFIQDSLQALNFNELTEVQEAVIPAALKGRDLIVQSQTGSGKSHSFLLPLI
ERIDPSIQEVQGVITAPSRELAEQLYQACRQITEQSPQPIQVVNYIGGTDKARQINRLQG
SGQPHIVIGTPGRIFDLMRENALWVQTTRMLVIDEADMTFDLGFLSIVDEIASRMPENLQ
MMAFSATIPQEVDVFLRKYMNQPMEIEIEAKEVISNTITNYLLNTKGRDRKALTYQLLTM
GNPYLALVFTNTKQYADEVSQYLKEQGLKVATIHGDVSPRERKRLMRQIRNLEFQYVVAT
DLAARGIDIPGISLVINTELPKELEFFVHRVGRTGRNQLEGTAITFITPDDDEVISTLED
KGIQFQTVELRQGELVEVEHRHRRKQRQAQANDDPVIRGMIKRNQKRKVKPGYKKKLNRE
IQSYKRQEARRKQNQQRWAKKKANREKYKGR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttactgagctgcccttagctccatttattcaagatagtttgcaagcgttaaat
tttaatgagttaaccgaagtgcaagaggccgttattcctgccgccttaaaaggccgtgat
ttaattgtccaatctcagacaggttccgggaaaagccatagtttccttttgcctcttatt
gaacgaattgatccgtctattcaagaagttcaaggggttatcacggctccgagtcgagaa
ttggccgagcaattgtatcaagcttgccggcaaataaccgagcagtctccccagccaatt
caggtggttaattatattggtggaaccgataaagcccgtcaaattaatcgattacagggc
agtggtcaaccacatattgtaattggaacaccgggacggattttcgatttgatgcgtgag
aatgcgctgtgggtgcaaacgacgcgtatgttggttattgatgaagcagatatgacattc
gatttagggtttctatccatcgttgatgagattgcttcgcgcatgcccgagaatttacaa
atgatggcattctcagctaccattcctcaagaggttgatgtcttcttgcgtaagtatatg
aatcaacccatggaaattgaaattgaagcgaaagaagtgatctcgaatacgattactaat
tacttattaaatacgaaaggtcgcgaccggaaagctttaacctatcaattgcttaccatg
gggaacccatacctcgccttagtttttaccaatacgaagcagtatgctgacgaagtgagc
caatatttaaaagaacaaggcctgaaagttgctaccatccatggcgatgtttcaccacgt
gagcggaaacgactcatgcgtcaaattcgtaatttagaattccagtatgtcgtagctacg
gatttagctgcgcgaggcattgatattccaggcatatctttggttattaatacagaactg
ccgaaggaattagagtttttcgttcaccgtgtcggacgaactgggcgcaatcaactggaa
ggaacggcgattacctttattactcccgatgatgatgaagttatttctactttagaagat
aagggcatccaattccaaacggtggaattacgtcaaggggaactggttgaagtagaacat
cgtcatcgccgcaagcaaaggcaagcgcaagcaaatgatgatccggttattcgtggtatg
attaaacgtaatcagaaacgcaaagttaaaccaggttataagaagaagctaaaccgagaa
attcaaagctataaacgccaagaagctcgtcgtaagcaaaatcaacaaaggtgggctaag
aagaaagcaaatcgcgaaaaatataaaggacgttaa
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