Actinobacteria bacterium: IMCC26256_111227
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Entry
IMCC26256_111227 CDS
T03963
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
abai
Actinobacteria bacterium
Pathway
abai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC26256_111227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abai03400
]
IMCC26256_111227
DNA repair and recombination proteins [BR:
abai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC26256_111227
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMCC26256_111227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
AKL73512
LinkDB
All DBs
Position
complement(1278251..1280278)
Genome browser
AA seq
675 aa
AA seq
DB search
MPPFELVSDFAPAGDQPEAIAALAVGLRRGDAAQTLLGITGSGKSFTIAGLIAEVQRPTL
VLAPNKSLAAQLASEFREFFPKNRVEYFVSYYDYYQPEAYLPSSDTFIEKDSSINSEIDR
LRHSATAALLSRRDVVIVASVSAIYGLGSPEMYARQLLTIKIGEEYEQRALLRRLVEMQY
ERNDMSFVRNKFRVRGDTIEIFPAYEERGIRISLFGDEVERISTVDPLTGEVYEELETMV
LFPASHYATEEEQMKAAVVGIEAELEEQLRSFHSSEKLLEAQRLRMRTTFDLEMMREVGF
CSGIENYSRHLDGRAAGDPPYTLLDYFPDDCLIVLDESHVTVPQLHGQYAGDRSRKETLV
EHGFRLPSALDNRPLQFEEFMEKVKQIVFMSATPSKYEVERSDQIVEQIIRPTGLLDPEV
VVRPTKGQIDDLVHEIRGRVERGNRVLVTTLTKKMSEDLTDYLVELGIRVRYLHSDIDTL
ERVELLRGLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSATSLIQIIGRAA
RNVDGQVIMYADRVTDSMKHAISETNRRRQHQMAYNLEHGIDPKTIIKKVADIMEMVRAR
EGDDDEAGSNTGGRRGRKKSAIFADLAGVAPEELGRLVAQLQEEMHQAAKDLRFEEAARI
RDEVNELKREIRASG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccgccatttgaactcgtctccgacttcgcaccggccggggatcagcccgaagcaata
gcggcactagcggtagggctccggcgcggcgacgccgcacagaccctccttggaatcacg
ggctccggaaagtcattcacaatcgccggcctgatagcagaggtgcagcgaccaactctt
gtgcttgcgcctaacaaaagtcttgctgcgcagttggcctccgagttcagagagttcttt
ccgaagaaccgcgtcgaatacttcgtctcctactacgactattaccagcccgaggcctac
ttgccttcttctgacaccttcattgagaaggattcgtcgatcaactctgagattgatcgg
ctgcgccactcagccactgcagcgctgctctcaagacgcgatgttgtaattgttgcctct
gtctctgcaatttatgggctcggatcgcctgagatgtatgcgcgccaattgctgacgata
aaaattggtgaggagtatgagcagagagcattgcttcggcgtctcgtggagatgcagtat
gagcgaaatgacatgtcatttgttcgtaataagtttcgtgtgcgtggcgacacaattgaa
attttcccggcctacgaagagcgaggaattcgtatatctctcttcggtgacgaggttgaa
cgcatctccacagttgatccactaaccggagaggtctacgaagagctagagacaatggtg
cttttccccgcctcccattacgcgactgaggaagagcagatgaaggcggcggtcgtcggt
atagaggcagagttggaggagcagttgcgctcattccattcgagtgagaaattgcttgag
gcacagcggctgcgcatgcgcacaacctttgatctcgagatgatgcgagaggttggtttc
tgctccggtattgagaattactcgcgccacttagatggacgtgctgcaggcgatccgccc
tacacgctcctcgattatttcccagatgattgtcttattgttctggatgaaagtcatgta
accgtcccgcagttgcatggacagtatgcaggcgaccgttcgcgtaaagagactctcgtt
gagcacggtttcaggctgccttcggcattggataatcggccgctgcagttcgaggagttc
atggagaaggtcaaacaaattgtcttcatgtcggcgaccccctcaaagtatgaggtggag
cgctcagatcagatcgttgagcagatcattcgcccaactgggctcctcgatccagaggta
gtggtgcgcccaactaagggtcagattgatgaccttgttcacgagattaggggacgcgta
gaacgtggcaatcgcgtcttagtaacaacccttacaaagaagatgtccgaggatttgact
gattacttggttgaactaggcattcgcgttcgctatctccatagtgatatcgacacacta
gagagagtcgagttgcttagaggcctgcggctcggcgagttcgacgtactagttggcatc
aacttgctccgtgaaggattagacctcccagaggtatcgctcgttgcaattctcgacgca
gataaagaagggtttcttcggtctgccacaagccttattcagattattgggcgggcagcg
cgcaatgtagatggtcaagtaatcatgtacgcagatcgcgtcactgactcgatgaagcat
gcgatctctgagaccaacagacgacgccagcatcagatggcctacaaccttgagcatggt
attgatccgaagaccattatcaagaaggttgctgacatcatggagatggtccgggcccgc
gagggggacgacgacgaagcagggagcaatacagggggccgtagaggcagaaagaagtcg
gcaatattcgctgatcttgccggtgtcgctccagaggaactgggaagactcgttgcacaa
cttcaagaggagatgcaccaggccgctaaagatctccgattcgaagaggcagcccggatt
cgcgatgaagtaaacgaactcaagcgagaaattcgagcgtcaggatag
DBGET
integrated database retrieval system
