Actinobacteria bacterium: IMCC26256_111296
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Entry
IMCC26256_111296 CDS
T03963
Name
(GenBank) F5/8 type C domain-containing protein
KO
K16648
arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
Organism
abai
Actinobacteria bacterium
Pathway
abai00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
abai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
IMCC26256_111296
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
abai01003
]
IMCC26256_111296
Glycosyltransferases [BR:
abai01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IMCC26256_111296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GT-C_AftD
F5_F8_type_C
CBM_AftD
NfI_DNAbd_pre-N
Motif
Other DBs
NCBI-ProteinID:
AKL73577
UniProt:
A0A0G3V3S7
LinkDB
All DBs
Position
complement(1346030..1350424)
Genome browser
AA seq
1464 aa
AA seq
DB search
MGRGSNSERPRPSARNRFAGYSLLAAISYIPVLLSDPGRVAADTKSYLSLDVGRLLERAW
SMWDPNIGLGTVTHQNIGYLFPMGPFYWVLNALGASGALTQRIWLGTIIFAAGLGMLYLF
RTLDVTGPGAVVGALAFMLSPYLLDYAARISVILLPWAGLPWLLAFTILALRKGGWRYPA
LIALTVQIVGGVNATSLIFAGLAPALWLPWAVWGSKEVSAKRMFAALARIGALTTTASLW
WLSGLWAQGNYGIDILKFTETVRTVAKTSTAPEVLRGLGYWFFYGQDKIGPWIESALPYT
QSVTHIAVSFAVPVLALLCATCIRWRHRSYFVLLAFVGVTIGVGAYSFDDPSPLGGVMKL
FATASSLGLALRSTGRATPLVVLAFSVFLALGVSGAYRSLSARGRSKLGAICVALTGALV
IANLPALWQGTFYGKNLQRSEQIPKYWSDALADVNKGSLDSRVLELPGSDFGSYRWGSTV
DPITPGLIDRPYVARELIPYGTPASADLLNAYDRRLQEGLYESIVTAPFARLLGVNEIVV
RNDLQTDRYNLIRPRQVWRDFNAPQSGLEAPRTFGSKIPGSAFFPQVDEQALAFPSNEGD
PPPVAVVRVTSPLSVVRTKSVQGTVIVAGDGEGIIDAAASGVIDGRQLVRYAASMTGPEL
QAAANEGATLVITDTNRKRARRWSTVRDNLGYTEQAGEKPLVQDLSDARLDVFPGAGDDS
FTVVEQRGVKRVVASAYGNPITYTAEDRASMALDGNLDTAWRVGAFSPVIGERILVEPKA
PITTNHFSLVQPLTGPRNRWITSVRIRFDGKGELKRVLDDSSRTSVGQRIDFPSRKFRTI
EIIVDGDSTGKRFSYEGLSGVGISELTIGSGDPVAEPLRVVEVTRVPTDLLERAGEASAR
QDLVILLTRERNTPVPPRAGNVEPALSRSFALPTPRTFTVGGVARLNPASPTHVIDSLLG
VSTVTATESEHLAGDARFRSSSAIDGDPLTAWNTPFVGTNGQWIEFHSQKQVRLSSLDMQ
VVADGRHSVPTKVTLSVDGKLVPLSLPPIKDQTSENATSLVHLDLPSTMSGRTLRLTIDE
VRETKTKDFYGGGESVMPVGIAELGAASLVEPSLASTRENKMFSTPCRDDLLSIDGEPVR
ISILGERSDALSRGGLRIIGCDELSLGIGRHTVIAVNGGTTALDLDRLDLRSLVSGSSAL
ASTPSPGVEARTAGDRVDGPTIGESTNTQVISRGRYWEKVRVTNATTREPLWIVLGQSQS
DGWSASIDGESLGASKLVDGYANGWRVTPTAKSFVVTMKWQPQGVVNKALVLSVLAALAC
LILAIWNPRRRQVLSGDSVDDGVVVLVAPWHARRRPTALRASFSVVSVLLIGSLVAGPLV
GISAALCVLIACVWPRLRALVALAPSACLAAAGIYIAWRQMRVGVPATFEWPLGFTRVHL
LGWGAVVFLVADSILNFGTDPPDA
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggctctaactcggagcggcctaggcccagtgcccgcaacaggtttgctggc
tactcgctacttgcggctatctcttatatcccagttttgctctccgacccagggcgcgta
gcggcggacaccaagtcttatctgtcactagacgtcggtcgactcctagagcgcgcatgg
agtatgtgggaccccaatatcgggcttggaacggttacgcaccaaaacattggatacttg
ttcccgatggggcccttttattgggtgctaaatgctctcggtgcctctggagcactgacg
cagagaatttggctcggcacgattattttcgcagccggcctaggcatgctctacctcttt
cgaacccttgacgtaacagggcctggagcagtagtaggagccttggcttttatgctcagc
ccatacttgctcgattacgcagcgcgcatatctgtgattctcttgccgtgggctggactc
ccatggttgctggcattcaccattttggctctacgaaagggcgggtggagatacccggcg
ctcatcgcactcacagttcagattgttgggggggtaaacgcaacatctctaatttttgct
ggcttggctccagcgctatggctgccttgggctgtgtggggcagcaaagaagtctcagca
aagcgcatgttcgccgctctggcacgcattggtgcgctgaccacgactgcctctctttgg
tggctctcagggctttgggcgcagggtaactatgggatcgacattctcaaatttactgag
actgtccgaaccgtagctaagacatctacggcccccgaagttctgcgcggactggggtat
tggttcttctacgggcaagacaagattggtccatggattgagtccgctcttccgtatacg
cagagcgtcacgcatattgcagtctcttttgctgtgccggtgcttgctctcctctgcgct
acttgtattaggtggcggcaccgttcttatttcgttctgcttgcatttgttggggtgacg
ataggagtaggtgcttattcctttgacgatccctccccgcttggcggggtaatgaagttg
ttcgctacggcttcatcacttgggcttgcactgcgcagcacgggtagagcaactccgctg
gttgttctcgccttctccgtatttttggctcttggagtatccggtgcataccgatcactg
agcgctcgagggcgaagcaaacttggggcaatctgcgtcgcgctgaccggagcattagtt
attgccaatcttccggcgctttggcagggcaccttctatgggaagaacctccagcgctcg
gagcagattccgaagtattggtcggatgcactagcggatgtaaacaagggctccctcgac
tcaagagtgctggagctccccggatctgatttcggttcttatcgatggggtagcaccgtt
gatccgataactcccgggctaatagatcgcccatacgtagcgcgggagctaatcccgtac
ggaaccccagcctccgctgatctactaaatgcctatgatcgccgccttcaggagggtctc
tacgagtcaatcgtcactgctccgtttgcgcgcttgctcggagtcaatgagattgttgtc
cgcaatgacctgcagacagataggtacaacctcattaggccgcgacaagtttggagggat
ttcaacgctcctcaaagcgggctagaggcaccacgcacatttggttcgaagattcctgga
tccgccttcttccctcaggttgatgagcaagcactcgccttcccatctaatgaaggcgat
cctcctccagtagcggtagttagggttacctcacccctctctgtcgttcggactaaaagc
gtccaaggaaccgtcattgtcgctggtgatggtgaaggaattattgatgctgcagcaagt
ggagtcatcgatgggcgtcaacttgttcggtacgcagcatcaatgaccggcccagagttg
caggccgctgccaatgagggtgcaacgctggtcatcacggatacgaataggaagcgtgct
cgtagatggagcacagtgcgcgacaatcttggctatacagagcaggcaggggagaagcct
ctcgttcaagatctctccgatgcgcgcctcgatgtcttccctggtgcaggcgatgattcc
tttactgtggttgagcagcggggcgttaagagagttgttgcatctgcctatggaaacccc
attacctatacggcagaagaccgtgcgtcaatggcccttgatggcaaccttgatacggca
tggcgcgtcggtgcattctcgccagtaatcggtgagcgaatcctcgttgagcccaaagcg
ccgataacgaccaatcatttctcgctagttcagccgcttacaggtccacgcaatagatgg
ataacaagcgtgagaattcggtttgatggcaaaggagagctaaagcgtgtgttggacgac
tcttctagaacctctgtcgggcagcgtatcgattttccctcaaggaaatttaggaccatc
gaaatcattgttgatggcgatagcaccgggaagcggttctcctatgaaggcctgagcggg
gtaggtatctcggagctcactatcggctccggcgacccggtcgcagagccattgcgagtt
gttgaggtaactcgtgtcccgactgatctccttgagcgagcgggagaggcatccgctcga
caggacctagtaatactcctcacacgcgaacgcaatacccctgtgccccctcgcgctggg
aatgttgagcctgcgttatcaagatctttcgctctgcctacgccgcgcacattcacggtt
ggaggagttgctcgacttaatcctgcgtccccaacccatgtcatcgattctctcttaggg
gtatctacggtcactgcaaccgagagcgaacacctagccggagatgcgcggttccgctcc
tcgtctgcaatcgacggagacccgctgactgcctggaatactcctttcgtcggaacaaat
gggcagtggatcgagtttcactcccagaagcaagtgagactctcaagcttggacatgcag
gttgttgctgacgggcgccactcagttccgacgaaggtgactctcagcgtggatggcaag
ttggttccgttgagccttccgcccataaaggatcagacgtcagagaacgcaacctctctt
gtccacctagatcttccgtcaacaatgagcggccgaactctgcgtctgactattgacgaa
gtgagagagactaaaacgaaggacttctacggcggaggcgaatctgtaatgccagttggt
atcgccgaacttggtgccgcgagtcttgtcgagccttctcttgcatcaactcgcgagaac
aagatgttcagtactccctgcagggacgacctgctgtcaatagatggagagccagtaagg
atctcaattttaggggagcgctcagatgccttatcacgtggaggattaagaatcatcggg
tgtgacgaactttccctcggaatagggaggcatacggttattgcggtaaatggcggtaca
accgctcttgacctcgaccgtcttgacctacgttcgcttgtatcaggatcgagtgccttg
gcgtcaaccccttcaccaggagtagaggcccgaaccgccggggaccgtgtagatggccca
actattggagaatctacgaatacgcaagtgatttctcgcgggcgttactgggagaaggtg
agagttactaatgcaacaactcgcgagccgctctggatcgtgcttgggcagagtcagagt
gatggctggagcgcgtcgatagatggagagagcctcggggcatcgaagctcgttgatggc
tatgccaacggctggagagtaactccaaccgcaaaatcgttcgtagtcacgatgaagtgg
cagcctcagggtgtagttaacaaggcattggtgctctccgtgctcgcggcgctggcgtgt
ctcatcttggcaatttggaaccctcgaaggcgtcaagtgctatcaggggactccgtggat
gatggcgtggtggtactcgttgcaccatggcacgcgagacgacgcccaacggctctaagg
gcttcattctcagttgttagtgtccttctgatcggtagtttggtcgccggcccgctggtc
gggatatctgcggcgctctgcgttctcattgcctgcgtatggccgcggcttcgggctttg
gtagcgctagcgccatccgcatgccttgcagctgcaggtatctatattgcttggcgccag
atgcgagttggggtacccgcgaccttcgagtggccgctcggtttcacgagagtgcacctg
ctcggttggggcgctgtcgtgtttcttgttgctgactcgatcttaaatttcgggactgat
ccgcccgacgcgtga
DBGET
integrated database retrieval system
