Actinobacteria bacterium: IMCC26256_112048
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Entry
IMCC26256_112048 CDS
T03963
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abai
Actinobacteria bacterium
Pathway
abai03420
Nucleotide excision repair
abai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC26256_112048
03430 Mismatch repair
IMCC26256_112048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abai03400
]
IMCC26256_112048
Enzymes [BR:
abai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC26256_112048
DNA repair and recombination proteins [BR:
abai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC26256_112048
MMR (mismatch excision repair)
Other MMR factors
IMCC26256_112048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
STN
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AKL74316
LinkDB
All DBs
Position
complement(2161597..2163987)
Genome browser
AA seq
796 aa
AA seq
DB search
MADTDREHPLLAGLNPVQREAVTAPDGPVLVIAGAGSGKTRVLTHRIAWLLAEHGVWRNE
ILALTFTNKAAGEMRDRVVELVGPQANRMWVSTFHSSCARILRQDAGLLGYRKEFSIYDQ
ADALRLVDYVRKDLDLDPKRFTSRSLHNAISSKKNDLITASMARDSASDAIEIRQAEVYV
EYQRRLAEASAVDFDDLLLLVVRLFRESTEALNRWRGRFKHVLVDEFQDTNLAQWEIVRM
LAEDHKAVMGVGDADQAIYKFRGADYRNIQRFEKAFPDLSTIVLEQNYRSTQNILSAANA
VISNNPGRSPKRLWTEQLGGELMLRYLAEDEQDEASYVANELQRLIDTDGVRHSEIAIFY
RTNAQSRVIEEKLVRNGVPYRVIGGIKFYDRREVKDVLSYLRALVNPDDEVAWKRIVNVP
KRGVGDTSVRKVDMYRSGAGVTFREGLVAGATAGLTGKALTGVTQLLAVMKSVEGEEDFG
VAKAIEMILAGTGYLAELEAERTIESEGRRENLAELVGAARDFDMHVERGDLGVLGAIAG
LDLAEGEGENGSAEVVVGIARVQAFLEAVSLVTDLDVVDGETAAVTLMTLHGAKGLEFPV
VFLTGLEDGVFPGWRSLVDPEEMEEERRLCYVGITRARERLYLTHAWSRQLFGATNYNPP
SRFLDEIPEELVHQLGEERRMSSGGLGASRDAVVRGALRSASAGSRRDSLSGSSFTGGRE
VKGSDDGPYSVPTPPAGARGAQEIGLRVGDDVMHEKFGEGVILDVFGTGDKAEVLIRFPN
AGEKRLLLAWAPITKI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccgacagagagcacccgctactagccgggcttaaccccgtgcagcgagag
gcagtgacggcccctgatggtccggtccttgtcatcgctggcgctggatccggaaagact
cgagttctgacgcatcgcatcgcttggctccttgccgagcatggagtttggcgcaacgag
attctcgctctcacgttcacgaacaaagccgcaggtgagatgcgcgatcgtgttgttgag
ttagtaggtccacaggccaaccgcatgtgggtatcgacatttcactcgtcgtgcgcgcgc
atccttcgccaagatgcagggctgcttggttatcgcaaggagttctcaatctatgaccaa
gcagatgcgctgcgccttgttgactacgttcgaaaggacttggacttagatccaaagcgc
tttacgtcgcgttctctgcataatgcaatttcctctaagaagaatgatctgataactgcc
tctatggcgcgcgactctgcgagcgacgcgattgagattcgtcaggccgaggtatacgtt
gagtaccagaggcggcttgctgaggcatccgccgttgacttcgatgatctgttgttattg
gttgttcgactctttagagagagcaccgaagcgctcaacagatggcggggccgctttaag
catgtcctcgttgatgagttccaagacaccaaccttgcgcagtgggagatagtgcgcatg
ctcgcagaggaccacaaggctgtgatgggcgtgggggatgcagaccaggcaatctataaa
tttcgcggtgctgactatcgaaacattcagcgctttgagaaggcgtttccagatctctca
acaattgttttagagcagaactaccgctctacgcagaatattctctctgccgctaatgcg
gtcatctcaaacaatcctgggcgtagcccaaagcgcctatggacagagcaacttggtggt
gagctcatgctgcggtacttggccgaggatgagcaggatgaggcgtcatacgtagcgaac
gagttgcagcgtttgatcgataccgatggggttcgccatagcgagatcgcaatcttctac
cgaaccaacgctcagagccgtgtgatcgaggagaaacttgttcgcaacggagtgccatat
cgagtaatcggcggtataaagttctatgaccgccgtgaggtcaaggatgttctgagctac
ttgcgcgcactcgtgaatcctgacgatgaggttgcgtggaaacgcattgtcaatgttcca
aaacgtggtgtcggcgatacctctgtccgcaaagttgatatgtaccgaagtggcgctggg
gttacttttcgagaggggctcgttgctggtgcgaccgcaggcctaactggcaaggccttg
actggcgttacgcagttgctcgctgttatgaaatccgttgagggcgaggaagatttcggt
gtcgccaaagccattgagatgattctcgctggcactggctatttggctgaattagaggct
gaacgcaccattgagtctgagggccgacgcgagaacctcgccgagttggtgggtgctgca
cgggactttgatatgcatgttgagcgcggtgaccttggcgtgctcggtgcgattgctggg
ctagatcttgcagagggtgaaggcgagaacggctcagctgaggtcgtagttgggatcgca
cgcgtccaggctttcttagaggctgtatcactcgttactgaccttgatgtcgttgatggt
gagaccgcagccgtgaccctcatgacgcttcatggggcgaaggggctcgagttcccagtt
gtattcctcactgggttggaggacggcgtcttccccggatggcgatcgcttgtggatcct
gaggagatggaggaggagcgcaggctttgctatgtcgggattacacgtgctcgtgagcgc
ctctacttaactcacgcgtggagtcgtcaactttttggggcgactaattacaacccgccg
agcaggttcttagatgagattccggaggaactcgttcaccaactaggcgaggagcgccga
atgagtagcggtgggcttggggcctctcgggatgctgtggtgcgcggagcgcttcgcagt
gctagcgctgggtcgcgcagggattcgttgagcgggtcgtccttcactggtgggcgtgag
gttaagggctccgatgatggcccttattcagtcccgactcctccggccggtgcgcggggt
gctcaggaaatagggcttcgcgtcggtgatgatgtgatgcacgagaaatttggcgagggc
gtgatcctcgacgtctttggaaccggagataaagccgaggtcttgatccgattcccgaat
gcaggcgagaagcgactgcttcttgcatgggccccgattacgaagatttaa
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