Actinobacteria bacterium: IMCC26256_112158
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Entry
IMCC26256_112158 CDS
T03963
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit, predominant form
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abai
Actinobacteria bacterium
Pathway
abai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IMCC26256_112158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abai03021
]
IMCC26256_112158
03400 DNA repair and recombination proteins [BR:
abai03400
]
IMCC26256_112158
Enzymes [BR:
abai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IMCC26256_112158
Transcription machinery [BR:
abai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IMCC26256_112158
DNA repair and recombination proteins [BR:
abai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IMCC26256_112158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKL74426
UniProt:
A0A0G3V7Z5
LinkDB
All DBs
Position
complement(2263180..2267556)
Genome browser
AA seq
1458 aa
AA seq
DB search
MLDVNASDKLSISLATADQIRAWSDGEVKKPETINYRTLKPEKDGLFCEKIFGPTKDWEC
YCGKYKRVRFKGIICERCGVEVTRSKIRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKQLEKVIYFASNLVTWVDTERLHTDRPTIEAESKAEIGDLEKKRDLEIEGRFQALEAE
LATAEAGGAKKADTDKIRKLAEREVEEMRERAQFDLDFEKTVFDTIKSLKVKQLIDDERV
WREIRYRVGEYFAGGMGAEAVKDLISRLDLESEEIELKELSQSAKGQKKARSIKRLKVVS
AFNRRDENGKVVNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRL
KRLLDLGAPEIIINNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFR
QNLLGKRVDYSGRSVIVAGPQLKLRQCGLPKQMALELFKPFVMKKLVDLEYAQNIKSAKR
MVERARPQVWDVLEDVIMEHPVFLNRAPTLHRLGIQAFEPVLIEGKAIQIHPLVCSAFNA
DFDGDQMAVHLPLSSEAQAEARILMLSAHNVLSPAHGSPIAVPSQDMIIGAYYLTVLETD
DKGVIRKFSDLAEEEREVFASLNEATMAYDTRAANGAPGVNLHRPLRIRVSGERFPEEQF
KARENWDEAKGEWITDPAAADNPVVRRASDGRVLVETSLGRLRFAEALPAAMAFPFGNND
TAFRKGDVSDVVGNLVAQFDKAEVATSLDNLKDLGFDYATRAGLTISIADVRTPPEKAKL
LNENEVKAAKVEQQYEQGILTDEERRQREIEIWTSATEDVTKVMRELQQGDIFNPIEMMI
GSGARGNVMQVRQIAGMRGLVANPRGEIIPRPIKSNFREGLSVLEYFISTHGARKGLADT
ALRTADSGYLTRRLVDVSQELIVRDIDCGSTRGIWIEDVGPESQRTLRTTIRSRCLAEDL
KLDDGTVLPRNTEITEELTDVLRDDSAVKRIRVRSALTCDSTRGICSSCYGTMLATGKMV
ELGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITHGLPRVVELFEARTPKGAAVLTE
TTGVVRLGDNEKGELVITVIADDGTEVEYPVSRRARLQVANGSEVTAGDALVGEASTPRD
PKRILDILGIRATQQYLVDQVQNVYREQGVSIHDKHVEVIVRQMLRRVTVLEPGDTEFLP
GSKVDSRKYAETNKALVDDGKRPAEGRPELMGITKASLATDSWLSAASFQETTRVLTEAA
IEGREDGLEGLKENVIIGKLIPAGTGMPVYREIATEAPFYEPMPYYSSDTEGLLEYLTTA
HEEQAAPDLSWIQPTAAEEQAFVEAVIEEVIEEVVESVEETLEILEEIVAEEAVAAISDI
MEAVAIAEVGATPEEIAEIEAIAAVEILEEIVAAEVAIEVLEELAVIEEVAEVLEVLETL
EILEVDETDEPGESAAGA
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacgcctcagacaagctctctatctctctcgccacagcggaccagatc
cgcgcgtggtcagacggtgaggtaaagaagccagagacgatcaactaccgaaccctcaag
cctgagaaggacggactcttctgcgagaagatcttcggcccgacgaaggactgggagtgc
tactgcggcaagtacaagcgcgtccgctttaaaggcatcatctgtgagcgctgcggtgta
gaggtcacacgctcgaagattcgtcgcgagcgcatgggccacattgagttagccgctcct
gttactcacatctggtacttcaagggtgtaccgagccgtcttggttacttgctcgatatt
gccccgaagcagcttgagaaggtcatttacttcgcgtcgaacctcgttacatgggtcgac
accgagcgtcttcacaccgatcgcccgaccatcgaggccgagtccaaggcagagatcggc
gatcttgagaagaagcgcgaccttgagattgaggggcgttttcaagcccttgaggcagag
cttgctaccgcagaggccggtggagccaagaaggccgataccgacaagatccgcaaactc
gccgagcgcgaggttgaggagatgcgcgagcgtgcacagtttgacctcgactttgagaag
acagtcttcgacacaattaagtctcttaaggtcaagcaactcatcgacgacgagcgcgta
tggcgcgagatcaggtatcgagtcggcgagtacttcgctggcggcatgggtgcagaggcc
gtcaaggatctcatcagccgtctcgaccttgagtctgaggagattgagctcaaagaacta
agccagagtgcgaagggacagaagaaggctcgctctattaagcgcctcaaagttgtctcg
gcattcaaccgtcgtgatgagaatggcaaggtcgttaactctccgcttgggatggttctt
gactgcgttccggttatccccccggacctgcgcccgatggtgcagctcgatggtggacgc
ttcgctacctcggatctaaacgacctataccgacgcgttatcaaccgtaataaccgtctt
aagcgactacttgatctcggtgcgccagagatcatcatcaacaacgagaagcgcatgctt
caggaggctgtcgatgcactattcgacaacggccgccgcggacgcccggtaacgggccca
ggtaaccgccccctgaagtcgctctctgacatgttgaagggcaagcagggaagattccgt
cagaaccttctcggcaagcgcgttgactactcaggtcgttccgtaattgtcgccgggcct
cagctcaaactccgccagtgcggacttccaaagcagatggcactcgagctcttcaagcct
ttcgtaatgaagaagcttgtagaccttgagtacgcgcagaacatcaagtctgcaaagcgc
atggttgagcgcgcgcgcccgcaggtgtgggatgtgctcgaggatgtgatcatggagcac
ccagtgttcctgaaccgcgccccaactcttcaccgccttggtatccaggccttcgagcct
gtgcttattgagggcaaggccattcagattcacccactcgtctgctcggcgttcaacgcc
gacttcgatggtgaccagatggccgttcaccttccgcttagttctgaggctcaggccgag
gcccgtatcctcatgctgagcgcacacaacgtgctctcacctgcacatggaagcccgatt
gcggttcctagccaggacatgattatcggcgcctactacctaactgttctagagaccgat
gacaaaggtgtgatccgtaaattctcggacctcgcagaggaagagcgcgaagtattcgca
tctcttaacgaagcgactatggcatacgacacgcgtgccgctaacggtgctccaggcgta
aaccttcaccgcccgttacgcattcgcgtctctggcgagaggttccctgaggagcagttc
aaggcacgtgagaactgggatgaagctaagggcgagtggattactgatccagccgcagcg
gataaccctgtagtgcgtcgcgcctctgatggccgagtccttgttgagacatcccttggg
cgtctccggtttgccgaggctctcccagcagcgatggctttcccgtttgggaacaacgac
acagcgttccgtaagggcgatgtctccgatgttgtcggaaacttggttgcgcagtttgat
aaggctgaggttgctacttcactagacaacttgaaagaccttggattcgactacgcaaca
cgtgctgggctcactatctcgattgctgatgttcgtacgccgcccgagaaggcaaaactc
ctcaacgagaatgaggtcaaggccgcaaaggttgagcagcagtacgagcagggcatcctg
accgacgaagagcgtcgtcagcgtgagatcgagatctggactagcgcgaccgaggatgta
accaaggtgatgcgcgagcttcagcagggtgacatcttcaacccaatcgagatgatgatt
ggttccggtgctcgtggaaacgttatgcaggttcgccagatcgcaggtatgcgtggtcta
gtggctaaccctcgtggtgagattattcctcgacccatcaagagcaacttccgtgaggga
ctctccgtccttgagtacttcatctcaactcacggtgcacgcaagggtctcgccgatact
gcactacgtaccgctgactctggttacctgacacgtcgactcgtcgatgtttcgcaggaa
ctaatcgtgcgtgacattgactgtggttcaactcgtggaatctggattgaggatgttggt
cctgagtcccagcgcacactgcgtacaactattcgcagccgctgcctcgccgaggacctt
aagttggacgacggtactgtgctcccgcgtaacaccgagatcactgaggaactaaccgac
gtactgcgcgacgactccgctgtgaagcgtattcgtgttcgctctgcacttacttgtgac
tcaacgcgtggaatctgcagctcttgctacggaacgatgctcgcaactggaaagatggtt
gaacttggcgaggcagtaggcatcatcgctgctcagtcaattggtgagcctggaacacag
ctcaccatgcgtactttccacactggtggtgtagccggagaggacatcactcacggtctg
ccacgcgtcgttgagttgttcgaggcacgtactcctaagggtgctgcggtcttgactgaa
acaacaggtgttgtgcgccttggcgataatgagaagggtgagttggtcatcactgttatc
gcagatgatggaaccgaggtcgagtacccagtatcacgccgtgctcgccttcaggttgct
aatggctcagaggtaactgccggagatgcactcgtcggcgaggcctcaaccccccgtgat
ccaaagcgtattctcgatattcttggaattcgcgctactcagcagtacttggttgaccaa
gttcagaacgtgtatcgcgagcagggtgtatcaatccacgacaagcatgtcgaggtaatc
gttcgtcagatgcttcgtcgtgtaaccgtgcttgagcctggagacacggagttccttccg
ggctccaaggtcgactctcgcaagtacgccgagaccaacaaggcactcgttgatgatgga
aagcgccccgctgagggtcgcccagagttgatgggaatcaccaaggcatctctcgccacg
gactcatggctatcggctgcctccttccaggagacaacacgagtgcttaccgaggctgcg
atcgagggtcgtgaagacggactcgagggtctcaaggagaatgtcattatcgggaagctc
atcccggctggtacgggaatgcccgtctaccgagagattgctaccgaggcccccttctat
gagccaatgccttattactcatcagacacagaggggcttctcgagtacttgacgactgcc
catgaggagcaggctgccccggatctctcttggattcagccgacagctgccgaggagcaa
gccttcgttgaggcggttatcgaagaggtaatcgaagaggtagtcgagagcgtcgaagag
acgcttgagatccttgaggagatcgtcgccgaggaggccgtagctgcaatctcggacatc
atggaggcagtcgcaatcgctgaggttggggcaactccagaggagatcgccgagattgag
gcaatcgccgctgtagagattctcgaggagattgtcgccgctgaggtggctatcgaggtc
cttgaagagctagcagtcatcgaagaggtcgccgaggttctagaggttcttgagaccctc
gagattctcgaggtagacgagacagacgagccgggggagagcgcagccggagcttga
DBGET
integrated database retrieval system
