Actinobacteria bacterium: IMCC26256_11289
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Entry
IMCC26256_11289 CDS
T03963
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
abai
Actinobacteria bacterium
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_8
PAS_9
PAS
PAS_4
GAF_2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AKL72589
UniProt:
A0A0G3V0H5
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All DBs
Position
281834..284839
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AA seq
1001 aa
AA seq
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MFHTSNSSHLLVNANSVRSDTLGDVSERHLSLSEDPAFLGALLSSSPLGIACITQNGELL
YGNEKLSEIFGQELESENIFGVLTDATLGQELVIQDAFDAVIKTGQWFGNLRIERPDGSF
CNVRNWVTSAAQAGGNYVSIFEDITSLDAALTQTDHLRSLLEESDALALVFDDQGTIRYA
NPTARRRLGLEGLTETELSLLNYLEVLRLTPESFELMISEVIPALLNSGQWSGETSFVNL
QGDFVETATDAHRNIGKDGQTFYTITVHDVTQLKNYAEELGRQEIWFRTIVAQSTDAVFV
VRRPDGIIYASPRAEDLLGIPLEEIIGIKLRQKIHPDDIEGLPYGSLNRPAIKRPYVDHP
IRVLNADGNYRFCEATAVNFDGDISDSASMITIRDITDRRRSETLVREQAGFLRLVASSA
PISNVLAALCDLVEETFVGAKAAVMRVSDGRLSFAGGPRMPDEFVDAMQSVPLGVEGGLC
GIAVEAGEPVYSFDISNDLRLEGCRDLLLRNGFKSVWSTPVDSSDEDAITASIAVFWHEL
HEVTTDEVALMATLCSLCSIAVDRKEYETRLSHQAHHDALTGLPNRSLFTELLSIATARA
SRGNTVNAVMFIDLDRFKEVNDSLGHDAGDELLINVASRLRECSRASDTIARFGGDEFVV
LCEDLDPESASGVITDLAERLLTSIDEPMMIKGQSLRVSASVGVAINGGNAKAAGMLRDA
DAAMYKAKKNGKARVEVFGDELRSSALNRLEMESGLRSASMNGELVLEYQPVINLVNGSI
EGVEALVRWLHPTQGMLQPASFIEIAEETGAISEVGNFVIREACSQLGRWIMDGDVSTNF
TVSVNVSARQFEGSGLIEVVRQALALSGLIPSQLVLEITEGTLMEPASIDALRELHDLGV
QVAIDDFGTGYSSLYYLKRFPVDIVKIDRSFVDGLGHDPDDEAIVSAVLGLGHALGLLVV
AEGVENETQMQALSALGCDSAQGFLISRPLPASAIPSLATH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatacctctaactcttcgcacctactggtaaacgctaatagcgtgcgctcggac
actttgggtgatgtaagtgaacggcacctgtcattatctgaagaccccgcttttctaggc
gctcttctctcgtcatctccgcttggtattgcatgcataacgcagaatggtgaacttcta
tacggcaatgaaaagttgagtgagatttttggtcaagaattagagagcgaaaatatattc
ggcgttctcactgatgcaacattgggccaggaactcgtaattcaagacgcatttgatgcc
gttatcaagacgggccaatggtttggcaatctaaggattgaacgcccagacgggtcattc
tgcaatgtacgaaactgggttaccagcgctgcgcaggcaggcggtaactatgtcagcatt
tttgaagatataacttcgcttgatgctgcgttaacgcagacagatcatcttcgatctttg
cttgaggaatctgacgccctcgctctcgtctttgacgatcaaggcacaattcggtatgcc
aaccccacagcgcgtcgcaggcttgggctcgagggtttaacagagaccgaactatccctc
ttaaattatcttgaagtactgcggttaactcccgagagttttgaactcatgatttcagag
gttattcctgctctactcaactctggccaatggagtggtgagacttcttttgtgaatctc
caaggagatttcgtggaaacggcaaccgatgctcatcgtaatatcggtaaagacggccag
acgttttacacgattacggtccacgacgttacacaacttaagaattatgcagaagaactt
gggcgccaagaaatctggttccgtacgattgttgcccagagcactgacgcagtatttgta
gttagacgacccgatgggattatctatgcaagccctagggcagaggatttgctcggtatt
ccgctcgaagaaattatcggcataaaattgcggcaaaagatacatcccgatgacatagag
ggactgccctacggatcattgaatcgccccgccataaagcggccctacgttgatcacccg
attcgagttctcaacgcggatgggaattacagattctgtgaagcaacggcagttaacttt
gacggggacataagcgattcagcctccatgatcaccattagggacatcacggatcgcaga
cgctctgagactcttgttcgcgaacaggctgggtttctgcggttggtggccagcagcgcc
ccaattagcaatgtccttgccgccctctgcgacctagttgaggaaacctttgttggggct
aaggcagcagtgatgagggtcagcgatggaagactttcgtttgcgggcggccctcgtatg
cccgatgaatttgtcgatgcgatgcagtccgttccccttggtgtagagggtggcctctgc
ggaattgcggtggaggcaggggaacccgtttactcctttgatatttctaacgatctgcga
ctcgaggggtgccgcgatttattactccgaaatggattcaagtcagtttggtcgacccct
gtcgatagctctgatgaggacgcaattactgcaagcatcgcagtcttctggcatgagctc
catgaagtaaccacagacgaagtcgctttgatggcgaccctttgctctttatgctcgatt
gcggtggacaggaaggaatacgagacgcgtctttcacatcaagcacaccacgatgcactt
acaggattgccaaatcgttcactcttcactgagttgttatccattgctactgcccgcgca
tctaggggaaacactgtgaacgctgtcatgttcatcgacctagatcggttcaaggaagta
aacgacagccttgggcatgacgccggagatgaactacttatcaacgttgcctcgaggttg
agggaatgctcacgagctagcgacacgattgcccgcttcgggggcgatgaatttgttgtg
ctctgtgaagatctagaccctgagagcgcgagtggagtcatcaccgatctcgccgagaga
ctgctcacatcaatcgatgagccgatgatgatcaagggacagtcgcttcgcgtctcggcc
agtgttggcgtcgctattaacggaggcaatgccaaagccgccggaatgctgcgcgacgcc
gatgctgcgatgtacaaggctaaaaagaatggcaaggcgcgggtcgaagtctttggcgac
gagctgcgttcatccgcactaaatcgattggagatggagagcggccttcgcagcgcttca
atgaacggtgagctcgtccttgagtatcaaccagtaatcaatcttgttaatggctcaatt
gagggcgtcgaggcgctcgtccgctggctccacccaactcaggggatgctgcagcccgca
tcctttattgagattgccgaggagaccggcgctatctctgaggttggcaactttgtcatt
agggaagcttgcagtcagttgggcaggtggatcatggatggtgatgtcagcactaatttc
acagtctcagtaaatgtctcagcgcggcagttcgagggatcgggcctaattgaagttgtg
cgtcaggcactcgcgttatccggtcttattccatctcagttagtgctcgagataactgag
ggcacgctcatggagccggcttcaatcgacgcacttcgtgaactccatgatctaggcgtc
caggttgctatcgacgactttggaactgggtactcgtcgctgtattacttaaagcgcttc
cctgtcgatattgtgaagattgataggtcatttgtagatgggctcgggcacgacccagat
gacgaagcgatcgtctcagcggtactcgggctaggccacgctcttggcctgctcgttgtg
gctgagggcgtcgagaacgagacacaaatgcaggctctaagcgctctcgggtgtgactcc
gcacagggattcttgatctctaggcctctcccggcctcagcgattccgtcgctagcaact
cattag
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