Actinobacteria bacterium: IMCC26256_11830
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Entry
IMCC26256_11830 CDS
T03963
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
abai
Actinobacteria bacterium
Brite
KEGG Orthology (KO) [BR:
abai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abai03016
]
IMCC26256_11830
Enzymes [BR:
abai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IMCC26256_11830
Transfer RNA biogenesis [BR:
abai03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IMCC26256_11830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
AKL73123
UniProt:
A0A0G3V015
LinkDB
All DBs
Position
865371..865946
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AA seq
191 aa
AA seq
DB search
MKSSNDSLRRLFVAVVPPLQVVEAVTSLLPRESSRLMQWTTPIRLHISIDFLGRVNGVDS
FLQDLSARVGVIDPFTVRLRGAGAFPEARRAEVFWLGIEDAESGLRAAHLVVLEAARVHG
IRIASHIFTPQLTIARLNRKADLRPDIAALEGVAIGEPWRVEEILLLDAPKPRGSKGDVS
FAQIGTLRLGQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagctccaatgattcgctacgacgtttatttgtcgctgtagttccgccgctacag
gttgtcgaggcagttacctcattgctgccacgcgaatcgtctcgcctcatgcaatggact
actccgatacgtctgcatatatctatagattttcttgggcgagtcaacggtgtagatagt
tttttgcaagacctttcagcgcgagttggcgtgattgatccgtttacggttcgtctgcgc
ggtgcaggtgcgtttcctgaagcgcgtagagccgaagtattttggctaggaatagaagac
gcagagtctggattacgcgccgcacatttagtcgtgctcgaggctgcacgcgttcatggg
attcgtattgcttcacatatttttacgccgcaattaacaattgctcgattgaatcgcaag
gcagatctaagaccagatattgccgctctcgagggggttgctatcggagagccatggcga
gttgaggagattctcctgctggatgctcccaagcccaggggctccaagggcgatgtgtca
tttgctcagattggtaccctcaggttggggcaatag
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