Acinetobacter baumannii LAC-4: ABLAC_18940
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Entry
ABLAC_18940 CDS
T03519
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abal
Acinetobacter baumannii LAC-4
Pathway
abal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABLAC_18940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abal03019
]
ABLAC_18940
03400 DNA repair and recombination proteins [BR:
abal03400
]
ABLAC_18940
Enzymes [BR:
abal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABLAC_18940
Messenger RNA biogenesis [BR:
abal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABLAC_18940
DNA repair and recombination proteins [BR:
abal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABLAC_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
CsoSCA_N
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIY37249
LinkDB
All DBs
Position
1973264..1975369
Genome browser
AA seq
701 aa
AA seq
DB search
MKDQALALLREMTGNPAAEFHDGQFQAISQLVEYQSKLLVVQKTGWGKSAVYFIATKLLR
MQGKGPTIIISPLIALMRNQIERAGQLGLKVVSINSSQSQDQNHAAKQQIINQNVDAVII
SPEQLANDEMIEDVLSHIISNIGLFVVDEAHCISDWGHDFRPDYRRIVRVLQHMPANMPI
LATTATANHRVITDINQQLGRYLQTIRGDLKRNSLYLQNIPTSSRVERMAWLAEKIPQLE
GTGIVYVKTVRDSELLADWLNHHGIKAACYYGGADDQERIRLEQALLSNSIKVLVATSAL
GMGFDKPDLGFVIHFQLPGSIVEYYQQVGRAGRGIDHAYGILMNGAETQEIQSYFIQNAF
PKEEEIEQILDAIEKCGGLKLYDIEPKTNLKFSRIQAVLKFLSVESPSPIYKDAQNKYCR
NEQDYSLPYDRIARVSQVKEQEWKQLTDYHQSKSCLMKELTLALDDPLADNCNNCMNCVP
KQQISSNVKHELVLAAAEFVKMRYVKIKARKQFARSSSVAREAFPQFQFAFRDQSLQASD
GLALSRWKDGVWGNVVAEGKKQGRFGDELLAPMVKMINSMQFDQKPQWLSYVPSLRHPQL
VKDFAYRLAAQLGIPCKDAIVMTSVRPPQKTMQNSFKQSQNLDGAFEIDTTQGFATPVLL
LDDAVDSGWTFTVVAALLRRAGVQAVYPIALTSTAQQDQGE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcaagcattagcattgttacgggaaatgacgggtaatcctgcagctgaattc
cacgatggacagtttcaagcgatttcgcaactggtggaatatcagtccaaactgcttgtt
gtgcaaaagacaggatggggaaaaagtgcggtttactttattgcgacgaaattattgcgt
atgcaaggtaaaggaccgaccattattatttcacctctgattgctttgatgcgtaaccag
attgaacgtgcaggacagcttggtcttaaagtcgtttcgattaattcatctcaatctcaa
gatcaaaatcatgctgcaaaacagcagattattaatcaaaatgtcgatgcagtgatcatt
tctccagagcaattagccaatgatgaaatgattgaagatgtactcagtcatatcatttcc
aatattgggttatttgtggtggatgaagcacactgtatttcagattggggacatgatttt
aggccggattatcgccgtattgttcgtgtattacagcacatgcctgccaatatgccgata
cttgccacaacagcaacagccaatcaccgtgtgattaccgatatcaatcagcaattaggg
cggtatctacaaaccattcgtggtgatttaaaacgcaactcgctgtatttgcagaatatc
ccgacaagtagccgagttgaacgtatggcttggttagctgaaaaaattcctcagcttgaa
ggaacaggaatcgtttatgtcaaaacagtacgagatagtgagcttttggcggattggctc
aaccatcatggtataaaagcagcatgctactatggtggtgctgatgatcaagaacgaatt
cggttagaacaagctttattgtcaaatagcataaaagtgctggtggcgacttctgcatta
ggtatgggatttgataaacccgatctaggttttgtgattcattttcagcttccgggtagt
atcgttgaatattatcagcaggttgggcgtgctgggcgtggcatagatcacgcttatggg
atactgatgaatggagctgaaacgcaagagattcagtcttactttattcaaaatgctttt
ccaaaagaagaagagattgaacaaatcttagacgcgattgaaaaatgtggtggattgaag
ttatatgatattgaaccgaagacgaatttgaaatttagtcgaattcaagcggttttaaaa
tttttaagtgttgaatcaccatcaccaatttataaagatgctcaaaataaatattgtcga
aacgagcaagattacagccttccttatgatcgtattgcacgtgtatcgcaagtcaaagag
caagaatggaaacagttaacagattatcatcaatctaaatcttgtttgatgaaagagctc
actttagctttagatgatccattagccgataactgtaacaactgcatgaactgtgtgcct
aagcagcaaatatcttctaatgttaagcatgaacttgtattagctgccgctgaatttgta
aaaatgcgttatgtaaaaatcaaagccagaaaacagtttgcacggtcttcttctgtggca
agagaagcatttcctcaatttcagtttgctttcagagatcagagtttacaggcatctgat
ggcttagcactctctcgttggaaggacggtgtttggggaaatgtagtcgctgaaggtaaa
aagcaggggcgatttggtgatgaacttttggcaccgatggtcaaaatgatcaactcaatg
cagtttgatcaaaaacctcaatggttgagctatgtcccatcgcttcgtcatcctcaattg
gttaaagattttgcataccgattggcagcccaattagggattccatgcaaagatgctatt
gtaatgacatcagttcgcccccctcaaaaaacgatgcaaaatagctttaaacaaagtcaa
aatttagatggtgcatttgagattgatacgacacagggttttgcaacccccgtattactc
ttagatgatgctgtagattctgggtggacatttacggtagtagccgcactattgcgacga
gcaggtgttcaagccgtttatcctattgctctaacgagtacagcgcagcaagaccaaggt
gaataa
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