KEGG   Acinetobacter baumannii LAC-4: ABLAC_31800
Entry
ABLAC_31800       CDS       T03519                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
abal  Acinetobacter baumannii LAC-4
Pathway
abal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABLAC_31800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abal03021]
    ABLAC_31800
   03019 Messenger RNA biogenesis [BR:abal03019]
    ABLAC_31800
Transcription machinery [BR:abal03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ABLAC_31800
Messenger RNA biogenesis [BR:abal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ABLAC_31800
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 AAA_22 NACHT AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: AIY38535
LinkDB
Position
3312957..3314225
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDKLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaaccaatcggcgaactaattaaaattgctgaattt
atgggccttgaaggtatggctcgtaaccgaaagcaagatattatctttgccatcttgaaa
cgccatgcgatgaatggcgaagaaatttttggtgacggcgttcttgaaattctctctgat
ggttttggttttttgcgctctgccgcaggttcgtatttagctggtccggatgatatttat
gtgagtccttcacaaatccgacgctttaacttgcgtacaggtgacaccatcacaggtacc
attcgtccaccaaaagaaggtgagcgttattttgctttgctcaaagttaatcaaattaac
tatgacacaccagaaaattcacgtaataaaatcttatttgaaaacttaactccacttttc
ccgaccgaacaactggttatggaacttggtaatggtacaacagaagacttgaccgcgcgt
gtagtcgatttagttgcaccaatcggtaaaggacaacgttctattattgtcgctccgcca
aaagcgggtaaaacaatgttacttcaaaacattgctcaatctattgtgagaaacaatccg
gaagttttccttattgttttattaattgatgagcgcccagaagaagtaaccgagatggag
cgtaccgtacgcggtgaagtcgttgcttcaacatttgatgaagcaccagcacgtcacgta
caagttgcagaaatggtcattgaaaaagcaaaacgtcttgttgagcacaaaaaggacgtc
gtgattttacttgactctattacacgtttagcccgtgcatacaacacagtaattccttca
tcaggtaaagtattaactggtggtgtggatgcacatgctttagaacgtccaaaacgtttc
ttcggtgctgctcgtaatatcgaagaaggcggttctttaacaatcatctctactgctctt
attgagactggcagtaaaatggatgatgtcatttacgaagagtttaaaggtacaggtaac
caagaaattacacttgatcgccgtattgctgaaaaacgcgtcttccctgccatgaatatt
aagaaatctggcacacgtcgtgaagaacgtttaatggatgaagataaattacgtaaagtt
tggattctccgcaaacttcttcaccctatggatgagttggcggctatggagttcttactt
gatcgtatgaaagaaaccaaaacaaatgatgatttctttgatcagatgaaacgtaaagct
tcaacataa

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