Acinetobacter baumannii LAC-4: ABLAC_33910
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Entry
ABLAC_33910 CDS
T03519
Name
(GenBank) ribonuclease E/G family protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
abal
Acinetobacter baumannii LAC-4
Pathway
abal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABLAC_33910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abal03019
]
ABLAC_33910
03009 Ribosome biogenesis [BR:
abal03009
]
ABLAC_33910
Enzymes [BR:
abal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ABLAC_33910
Messenger RNA biogenesis [BR:
abal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABLAC_33910
Ribosome biogenesis [BR:
abal03009
]
Prokaryotic type
rRNA processing factors
ABLAC_33910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AIY38746
LinkDB
All DBs
Position
3528213..3531545
Genome browser
AA seq
1110 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHVTATASTHAAAQKKA
NHATQPVAQPSAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQ
FGQVAVPAVAEVAPVQSNNAYISQSPVKQDVREHVEKDDKSQQQRQNNKKRKHKEQREQH
HQSHEQQHQVHEEVVQLSRQEQRELKRQQKRQQQQDQQHQNNDVQHTENAVPRRDRNNQQ
RPNRPNRHRDPSVLNENQNTPVVVDEKQIKVDVIDAPKHDVMNTALIINVDQGQSEIVAL
TPERRHVERVETTSTEVAQEPTPAPVVAEKAAVVETKEEAQPSQEAAQPQIKRASNDPRM
RRRQQREAKHAKAATPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL
QKFAEQYASTLVVEVTAETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPPQAPAPRVAN
DPRERRRLAKLAAEQAFEQVKQQHSAQEEVATPAPVAEETVAAPTAETQATVEPAQQPLE
LNQSTEVVQPEAAPAEEKATEETVAEAPAAKEPAPSKAASKAKAAAEETVAPTEATTDAE
SEDVKADKDKPSRPRRPRGRPPKKANPVAE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaactcatgccgaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagagaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtcacccgcgtagaaccatctttagaagctgtttttgttgaatat
ggcgcaggtcgtcaaggcttcttgtctatgcgtgaaattgcgaacagctattttcaggca
gacccacgtcaaacttcaaacattcgtgaacttattactgaaggcacagagcttttagtt
caggttgaaaaagaagaacgtggtaataaaggtgcagcactttctacgtttatttccctt
gcaggccgttatttagttcttatgccaaataacccgaaaggtggtggcattagccgtcaa
atttcaggttcagtacgtgaagaattaaaagaaattttagcttctttaaatgtacctcgt
ggtatgagcgtgattgttcgtactgccggtattgggcgtactcaagaagaattacagctc
gatttacaacacttgcttgacctttgggcacaaatccaaggtacagcgagctcaggccct
tctccgatgcttgttcatcaagaagcgggtgtagtaacacgtgcaattcgtgattactta
cgtgatgacgttgctgaaatcttaattgatagcgaacaagcttataacgaagcatataac
tttgttaaagcagtgatgcctcgtcaattagacaaattaaaaacttatactttaaacgag
ccattgtttgctcattttggtattgaaagccaaattcaaactgcttatgaacgtgaagta
aaacttccttcaggcggttcaatcgtcattgaccagactgaagctttagtttcaatcgat
attaactctgcgaaatcgactcgcggtcatgatgttgaagaaactgcactgaatactaac
cttgaagcagcagaagaaattgctcgccaactgcgtttacgtgacattggcggtttagtt
gttatcgacttcatcgatatgactaaagaacgcaatcaacgtatggttgaagcaaaactt
cgtgaagcaacacaaagcgatcgtgcccgtatccagttcggtcaattgtctcgttttggc
ttaatggaaatgagccgtcaacgcttacgcccatcgcttgaagaagcaacaggttatgta
tgccctcgctgtcatggtacaggcatggttcgtgatttacgttcgctttctctttcaatt
atgcgtaaagttgaagagattgcactccgcgaacgtcatggtgaagttcaggttgaagtt
ccagttgaaattgcagccttcttgcttaatgaaaaacgccatagtctggtgtatttagag
caaacttctggtgtacgtgtgactgtattaccacacccgcacttagaaactccacattac
gaaattgcatataacccagatggctttgctccatctagctatgaacgtacagaagcaacc
cgttctagcgagaaagagttaggttatgagtcttctgaatggcatttagaagaagcagat
catggccatgctcatgtaactgctacagcttcaactcatgctgcggctcagaaaaaagca
aatcatgcaactcaacctgtagcacaaccttctgctcaaaaagcagcaagcccatgtgca
tggttagaaaacctgtttgttcaaaaacaagcgcaaacagttgatcaatctcgttcagca
caaaatgctgctgctgcgattgagcaaatggtgaatacaggcgcagtaagccgcggacag
ttcggtcaagtagccgtacctgctgttgcagaagttgcgccagttcaatcaaataacgct
tatatttcacagtcacctgtgaaacaagacgttcgcgaacatgttgaaaaggatgataaa
tctcagcaacaacgtcagaacaacaaaaagcgtaaacataaagagcaacgtgaacaacat
caccaatcacatgaacagcaacatcaagttcatgaagaagtggttcaattgtcacgccaa
gaacaacgtgagttaaaacgtcagcaaaaacgtcaacagcagcaagatcagcaacatcaa
aataatgatgtacaacacactgaaaatgctgtgccacgtcgtgaccgtaataatcaacaa
cgtccaaaccgtccaaatcgccaccgcgatccaagtgtattaaatgaaaatcaaaataca
ccggttgttgttgatgaaaaacaaattaaggttgatgtgattgatgcacctaagcatgat
gtcatgaacactgctttaatcatcaatgttgatcaaggtcaaagtgagattgttgcactt
acacctgagcgtcgtcacgttgagcgagttgaaacgacttctactgaagttgctcaagag
ccaactccagctcctgttgtagccgagaaagctgctgtagttgaaaccaaagaagaagct
cagccaagccaagaagctgctcagccacaaatcaaacgtgctagcaatgaccctcgtatg
cgtcgtcgtcagcaacgtgaggctaaacacgctaaggcagctacgccatctattgcgcca
tcgcaaattccaactttggcacaacacacaatcggtagtttaatccgtcatgtgtatggt
gaagattgcaccgtattgattgaacaatttggtctagtcccaacgtttaatcgtgctttg
cagaaatttgcagaacagtacgcaagtacgttagtagttgaagttactgctgaaacggaa
gagaaaaagccggtaactcgtgatgcagaacttccaagccacaaaccggctgaagaagca
gaacctgcaccagtacttccgcttactccgccgcaagcaccagctccacgtgttgcaaat
gacccgcgtgagcgtcgtcgtttagcaaaacttgctgcggaacaagcatttgagcaagtg
aaacaacaacattctgctcaagaagaagttgctactcctgctcctgtagcagaagaaacc
gttgctgctccaactgctgaaacacaagcaacagttgaaccagcacaacaaccgcttgaa
cttaatcagtcaactgaagtcgtacaacctgaagctgctcctgcagaggaaaaagctaca
gaagaaacagtagctgaagctcctgcagcgaaggaaccggcgccatcaaaagcagcaagc
aaagcaaaagcagcggctgaagaaacagtagctccgactgaagcaacaactgatgccgaa
tcagaagacgttaaggcagataaggacaaaccgagccgccctcgtcgccctcgtggccgt
ccgccaaaaaaagctaatcctgtagctgagtaa
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