Candidatus Nanopelagicus limnae: B1s21122_00015
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Entry
B1s21122_00015 CDS
T05073
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1s21122_00015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_00015
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1s21122_00015
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SbcC_Walker_B
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ASY08763
UniProt:
A0A286S9H2
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All DBs
Position
2885..3973
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AA seq
362 aa
AA seq
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MLITNLNLTNYRSYSSLDLPLTSGISIFVGKNGEGKTNIAESILYLTFLSSHRASGNTPL
IKLGNQSAYIRAKVQYPEREILVELEINSEKANRAKVNQNQVRSQKEIFGIVQTIYFSPE
DLDIVRGDPSERRRFIDQLLTLRSPRAAGVITDYDRAVKQRNSLLKTRASNDALIPWDKQ
VAQFGGELIALRMAALVELKPIFNNIYKDISDTKPAEIIYKSSIENPSINPSENSEKIME
KLTLNRGAETERGLTLTGPHRDDLVLALGDHLVKGYASHGESWSIALSLKLATYNLLKSD
GLSPILILDDVFSELDEDRREKLAQIAQSAEQTLITVAVENDLPKSIKGTRHLVKSGVVS
KL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgttaatcaccaatctaaacctaactaattaccgatcttattcctcactagatctacca
cttactagtggcatctcaatatttgttggtaagaacggtgaaggaaaaaccaatattgct
gaaagcattctttatttaaccttcttaagctcacaccgggctagtggaaataccccacta
attaaactaggtaatcaaagtgcttacattcgtgccaaagtgcaatacccagagcgggag
attttggttgagttagagattaatagcgagaaagctaatcgagccaaagtaaatcaaaat
caagttcgaagtcaaaaagagatctttggaattgttcaaaccatttatttctcacctgag
gatttagatattgtgcgaggggatccaagtgagcgccgcagattcattgaccaattatta
actttaagatccccaagggcggccggagttatcaccgattatgaccgcgcagttaaacag
cgaaactcattacttaaaaccagagcctcaaatgatgcgttaataccttgggataaacag
gtcgcacaatttggaggcgaattaatagcgctgcgaatggcggccctagttgagttaaaa
cccatatttaataatatatataaagatatttcagatactaaacctgctgaaataatctat
aaatcaagtattgaaaatccttctattaacccaagtgaaaacagtgaaaaaataatggag
aagctaactttaaatagaggggcagaaacggaacgtggtcttactttaactgggccacac
cgcgatgatttagttttagcactcggtgatcacctagttaaaggttatgccagccatggt
gaatcctggtcgattgctttatctttaaaacttgcaacatataatcttttaaaatcagat
ggcttatcaccaattttaattttagatgatgtgttctctgaattagatgaggataggcga
gagaagttggctcaaattgcgcaaagcgccgagcaaaccttaatcactgtcgcagttgaa
aatgatctacctaaatcaattaaaggcacaaggcatttagttaagtcaggcgtggtgagc
aaattatga
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