Candidatus Nanopelagicus limnae: B1s21122_00030
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Entry
B1s21122_00030 CDS
T05073
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
abam
Candidatus Nanopelagicus limnae
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abam03032
]
B1s21122_00030
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_00030
Enzymes [BR:
abam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B1s21122_00030
DNA replication proteins [BR:
abam03032
]
Prokaryotic type
DNA Topoisomerases
B1s21122_00030
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1s21122_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
SipA_2nd
Motif
Other DBs
NCBI-ProteinID:
ASY08766
UniProt:
A0A286S9I0
LinkDB
All DBs
Position
6573..9056
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AA seq
827 aa
AA seq
DB search
MDKTFIDHEGEHGRDRQESVDLQVEMARSYLDYAMSVIVGRALPDIRDGLKPVHRRVLYA
MYDAGYRPDKGYYKSSRIVGDVMGNYHPHGDTAIYDAVVRLAQFWSLRYPLIDGNGNFGS
PGNDPAAAMRYTEARLAPLAMEMMRDIDEETVDFIPNYDGRSQEPTVLPSRFPNLLVNGS
AGIAVGMATNIPPHNLNEVIEATCFALENPELESEKLLAKLTTIVKGPDFPTKALIVGRG
GIEDAYKTGRGSIIMRAVVEVEEINKRTCLVVTELPYQVNPDNLALKIAELVKDGRIKGI
ADVRDEGNERLGQRLVIVLRNDAVAKVVLNNLYKHTQLQDSFGANMLALVDGVPRTLRLD
EFIRYYIEHQVEVIVRRSKYRLVEREKRAHILKGYLKALDALDAVIALIRASKTPEEART
GLMKLLEVDELQANAILDMQLRRIAALERQKIIDEHDELMADIKELKIILDSPEKQRLII
KDELTEVGSKYGNDRRTQIIAGDTDLSVEDLIPDQDVVVTITKGGYSKRTKADAYRAQKR
GGKGVKGAALKTDDVVEHFFTASTHNWLLFFTNKGRVYRAKVHELPDAGRDARGQHVANL
LAFKPDETIAQVIAIEDYLTQPYLVIATKAGIVKKTPLPEYDSPRSGGLIAVSLKANDEV
VSATLVSEKEELLLVSKMGMSLRFSANDETLRPMGRGATGVIGMKFRKGDNLLAMAAISS
DNKNYVFTATDGGYAKRTKLEEYRSQGRGGIGVKAAKIDEDSRGVLVGAMIVQEKDEILA
ISSAGTVMRTPLAQIRETGRDTLGVRLVNLDPGISVVSVTRLVDDLD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacatttatagatcacgaaggtgaacatggtagagatcgacaagaatctgtt
gatctacaagttgaaatggctaggtcatacctagattacgcaatgagcgtaattgttggc
cgagcacttccagatattagagacggtttaaaaccagtacaccgccgagttttatatgca
atgtatgacgctgggtatcgaccagataagggttattacaaatcatctcgaattgttgga
gatgtaatgggtaattaccatccacatggtgacaccgctatttatgacgcagtagttcgt
cttgctcaattctggtcacttcgttatccattaattgatggcaatggaaactttggatct
cctggaaatgatccagcagcagccatgcgttataccgaagctcgcctagctcctcttgca
atggagatgatgcgagatattgatgaagaaacagttgatttcattccaaattacgatggc
agatcacaagagccaactgttttaccatcccgctttccaaaccttttagttaatggctct
gccggcattgcagttggtatggccaccaacatcccaccacataatttaaatgaggtaatt
gaggcaacctgttttgcattagaaaacccagagctggaatctgaaaaattattagctaag
ttgacgacaattgttaaaggcccagattttccaactaaagcattaattgttggacggggt
ggaattgaggatgcttacaaaactggccgtggttcaatcatcatgcgagcagttgttgag
gttgaagagattaataagcgtacatgtcttgttgttactgaacttccttatcaagtaaac
ccagataacttagcgttaaaaattgcagaacttgttaaagatggccgaattaaaggaatt
gcagatgttagggatgaaggaaatgagcgcttaggccaacgcttagtaattgttcttcga
aatgatgcagttgcaaaggtagttttaaataatctttataaacacactcaattacaagat
tcctttggcgccaatatgttggcattagtagatggtgtgccaagaacattacgtcttgac
gagttcattcgttattacattgaacaccaagttgaggtaattgttagacgaagtaagtat
cgattagttgagcgagaaaaaagagctcacatattaaaaggttacttaaaggcactggat
gcacttgatgcggtaattgcattaattagagcaagcaagactccggaagaagcacgcact
ggattaatgaaattacttgaagtagatgagctgcaagcgaacgcaatcttagatatgcaa
cttagaagaattgccgcccttgaaagacaaaagattattgatgaacatgatgagttaatg
gctgatatcaaagagttaaaaatcatcctagatagcccagaaaagcagcgattaatcatt
aaagatgagctaaccgaggttggcagtaagtatggcaatgacagacgtacccaaattatt
gccggtgatactgacttgtcagttgaagatttaattccagatcaagatgtagtggtaacc
attactaagggtggatattcaaagagaacaaaggcagatgcctatcgcgcccaaaagcgc
ggaggtaaaggcgttaaaggtgcggcgttaaaaacagatgatgttgttgagcatttcttt
accgcaagtactcataactggttgttgttcttcacaaataagggccgggtatatcgggca
aaggttcatgaattaccagacgcaggccgtgatgctagaggacagcatgttgcaaacttg
ttagcttttaagccggatgaaacaattgcgcaggttattgcgattgaagattatctaacc
cagccttatttagtaattgcaacaaaggcaggaattgttaagaagaccccactacctgag
tatgactcaccaagaagtggcggcttaattgcagtctcattaaaagcaaatgatgaagtg
gtctctgcaactttagtgagcgaaaaagaggagttgttattggtttcaaagatgggaatg
tcacttagattctctgccaacgatgaaaccttgcgtccaatgggacgaggagcaactggt
gttattggaatgaagtttagaaaaggtgacaacttattagcaatggctgcgattagtagt
gataataaaaattatgtatttaccgcaactgatggtggttatgccaagcgaacaaagctt
gaggagtatcgaagccaagggcgaggcggaattggtgtgaaggcagcaaagattgatgaa
gactcacgtggtgtattagttggcgcaatgatcgtgcaggaaaaagatgagatcttggcg
atctcatcagctggcacagttatgcgaactccactggcacagatccgtgagactggccga
gacactttaggagtcagactggttaacctagatccaggaatctcagtagtatctgttact
cgcttagttgatgatcttgattaa
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