Candidatus Nanopelagicus limnae: B1s21122_00360
Help
Entry
B1s21122_00360 CDS
T05073
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
abam
Candidatus Nanopelagicus limnae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Motif
Other DBs
NCBI-ProteinID:
ASY08826
UniProt:
A0A249JWE3
LinkDB
All DBs
Position
complement(1190392..1191690)
Genome browser
AA seq
432 aa
AA seq
DB search
MSFKDLGVNAALTKVLHTSGIEKPFPIQKATLPDAIAGKDILGRGQTGSGKTLAFGLALM
TRLAGRNAASMRPLALVLSPTRELAMQISDVIAPLSRSVNLNSQVVAGGLSYSKQIQALK
RGVPIVVATPGRLIDLIQKKHIKLDDIEITVLDEADQMADMGFLPDVKRILDLTKPGGQR
MLFSATLDKDVDSLVKKYLRNPVTHSLANEKSTAGNMTHHVLIMEQSHKDLITSQIAARK
GKSIFFVRTKHGADKLTKRMNEAGVSVGALHGGKTQAQRSRVLEAFKSGATNALVATDVA
ARGIHVDDVSLVVHVDAPENHKDYLHRAGRTARAGAVGTVVTLATHKQRKGVHGLAARAG
VRLNESTVRPMDANLVKVTGAAEPSGIPIVTATSTKSGGGGRSGGYRGSRSKGGGKKKKS
RPRPHERRKRPR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagatttaggcgttaacgctgcgcttaccaaggtattacatacctctgga
atcgaaaagccatttccaattcaaaaagcaacactgcctgatgcaatcgctggtaaagat
attttaggtcgaggtcagacaggttcaggtaaaactcttgcctttggtttggcgttaatg
accagacttgctggaagaaatgctgcctctatgaggccacttgctttggttttatcacca
actagagagcttgcaatgcagattagcgatgtgattgcacctttgtcacgatcagttaat
ttaaattcacaggttgtcgcaggtggactttcttactcgaaacagattcaagctttaaaa
cgtggcgtgccaattgttgtagcaacccctggcagattaattgatttgattcaaaagaag
catattaagttagatgatattgagataactgttttagatgaagcagatcaaatggcggat
atgggatttttgccagatgtgaaaagaattttagatttaactaagcctggtggccagcga
atgctatttagcgccacattggataaagatgttgactcattggttaagaagtacttaaga
aatcctgttacccactctcttgctaacgagaaatcaactgcaggaaatatgactcaccat
gtgttgataatggagcagtcacacaaagatttaattacctcacagattgcagctagaaaa
ggaaagagtattttctttgttagaactaagcatggggcagataagttaactaagcggatg
aatgaagcaggagtttcagttggagcactccatggtggcaaaactcaagcccaaagatca
agagtcttagaggcatttaagtcaggagctacaaacgcgttagttgcaacagatgtagca
gcacgaggaattcacgttgatgatgtctcgcttgtagttcatgttgatgcaccagaaaat
cataaagattatttacacagagctggcagaactgcaagggccggcgctgttggaactgtg
gtaactcttgcaactcataaacaacgaaaaggtgtgcatgggttagcggcgagagcagga
gttcgattaaatgaatcaactgttaggccaatggatgccaatttagtaaaggtaactgga
gctgcagagccatctgggattccaattgttactgccacaagtacaaagagtggtggtggc
ggtagatctggcggttatcgcggttcaagatctaagggtggcggtaagaagaagaaatct
aggccacgtccacatgagcgccgaaagcgcccaaggtag
DBGET
integrated database retrieval system
