Candidatus Nanopelagicus limnae: B1s21122_00485
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Entry
B1s21122_00485 CDS
T05073
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
abam
Candidatus Nanopelagicus limnae
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
abam03110
]
B1s21122_00485
Chaperones and folding catalysts [BR:
abam03110
]
Heat shock proteins
HSP100
B1s21122_00485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
ATPase_2
UVR
nSTAND3
AAA_18
AAA_14
bpMoxR
AAA_3
RsgA_GTPase
IstB_IS21
NACHT
AAA_24
AAA_19
DNA_pol3_delta2
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
ASY08850
UniProt:
A0A249JWF5
LinkDB
All DBs
Position
complement(1164763..1167261)
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AA seq
832 aa
AA seq
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MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKGLESLGISLEAVR
SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLSRVRQQVIQLLSGYQGKEAVAAGGPAEGQPSTSLVLDQFGRNLTQAARE
GKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGDIPETLKD
KQLYSLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDA
ASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPTVAHTIEILKGLRD
RYESHHKVSISDGALVSAATLADRYVSDRHLPDKAIDLIDEAGSRLRIRRMTVPPEIREY
DDKIAAARKEKESAIDGQDFEKAASLRDKEKSLITEKAEREKNWKAGDLDVVAEVDEELI
AEVLSTATGIPVFKLTEAETARLLKMEDELHRRVIGQDQAIKALSQAIRRTRAGLKDPKR
PGGSFIFAGPSGVGKTELSRTLAQFLFGDSDALIQLDMSEYSEKHTASRLFGAPPGYVGY
DEGGQLTEKVRRRPFSVVLFDEIEKAHPDIFNSLLQVLEDGRLTDAQGRVVDFKNTIIIM
TTNLGTRDISKSLSLGFANVADAQGSYERMKAKVGDELKTHFRPEFLNRIDDIVVFHQLT
ENEIVKIVDLMVAQLDERLKAKDMGIELTTGAKSLLAKRGYDPVLGARPLRRTIQRELED
VLSEKMLFGDLKAGEIILVDVSDATDTATFTFKGTPKSALPDAPGDLAEATS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacggtttaccgatcgtgccagacgcgttgttgtgctggcgcaagaagaagca
cgcatgctcaaccataactacatcggtactgaacatattcttttaggtttaattcatgaa
ggtgaaggcgttgccgcaaaaggacttgagtcccttggtatctcactagaggctgttcgc
tcacaggtagaagaaattattggtcaaggacaacaagcaccatctggccacattccattt
acaccacgtgctaaaaaagttttggagttatcacttcgtgaagctttgcaactaggacac
aactacattggtactgaacatattcttctgggtttaattcgtgaaggtgaaggagttgca
gcgcaagttttggtaaaacttggcgcagatctttctcgcgttcgccaacaagttattcaa
ttactttctggctaccaaggcaaagaggcggttgcagcaggtgggccggcagagggtcaa
ccatcaacatcattagttttagatcagtttggccgaaaccttacgcaagcagcccgtgaa
ggaaagcttgatccagtaattggtagagaaaaagagattgagcgagttatgcaggtgcta
tctcgtcgtaccaaaaataacccagttctaattggtgaaccaggagttggtaagactgca
gttgttgaaggattagcccaagcaattgtgaagggtgacatcccagagactcttaaagat
aagcagctttactcattagatcttggcgctttagttgccggttctagataccgcggagat
tttgaagagcgattaaagaaagtattaaaagagattcgcacccgtggcgacattattttg
tttattgatgagattcacacattagttggcgcaggagcggctgagggcgcaattgatgcg
gcttcgatattaaagccaatgcttgcccgcggtgagttacagacaattggcgcaactaca
ttggatgagtatcgcaagcacttagaaaaagatgcagctcttgagcgacgctttcagcca
atccaagttgccgagccaactgttgctcacacaattgaaattctaaaaggacttcgcgat
cgctatgaaagccaccataaggtttccatctcagatggcgcactagtttctgctgcaaca
cttgccgatcgttatgtttcagatcgccatctgccagataaagcgattgatttaattgat
gaggcaggctctcgtcttcgaattcgccgaatgactgtgccacctgaaattcgtgaatat
gatgacaagatcgcagctgctcgcaaagaaaaagagtcagcaattgatggccaagatttt
gaaaaggctgcatccttgcgtgataaagagaaatctttaatcactgaaaaggcagagcga
gagaagaattggaaagcaggcgatcttgatgtggttgctgaggtagatgaagagttaatt
gctgaagttctttcaactgcaactggtattccagtatttaagttaactgaggcagagact
gctcgattacttaagatggaggatgaactacatcgccgcgtaatcggtcaagaccaagct
atcaaggcattgtcacaagcaatccgtagaacacgtgctggacttaaagatccaaagcgt
cctggcggatcatttatctttgctggcccatctggtgttggtaagacagagctttcaaga
actcttgcccaattcctatttggtgattcagatgcattaattcaattagatatgtctgag
tactcagaaaaacacaccgcatctcgtttatttggtgcccctcctggttatgttggttat
gacgagggtggtcagttaactgagaaggtgcgacgtcgtccattctctgttgttttattt
gatgagattgaaaaagcacatccagatatcttcaactcacttctgcaggtattagaggat
ggtcgattaactgatgcgcaaggtcgtgtggtggactttaagaacaccatcatcattatg
actaccaaccttggtactcgcgatatttcaaaatcattatcacttggctttgccaatgtg
gcagatgcccaaggaagttatgagcgcatgaaggcaaaggtaggagatgagctaaagact
cacttcagacctgagttcttaaaccgtattgatgacatcgtggtattccaccagttaact
gagaatgagatcgtcaagattgttgatctaatggttgctcaattagatgagcgcttgaag
gcaaaagatatgggaatcgagttaacaaccggtgctaaatcattgctagcaaagcgaggt
tatgacccagtacttggcgctcgcccacttcgcagaacaattcaacgagagcttgaagat
gtgttatcagagaagatgctctttggtgatctaaaagctggtgagattattttggtagat
gtttcagatgcaactgatactgcaacctttacctttaaaggaacaccaaaatccgctttg
ccagatgcacctggtgatttagcagaagctactagttaa
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