Candidatus Nanopelagicus limnae: B1s21122_00490
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Entry
B1s21122_00490 CDS
T05073
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
abam
Candidatus Nanopelagicus limnae
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_00490
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1s21122_00490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
AAA
DUF7125
Lon_C
AAA_16
RecA_N
ABC_tran
NTPase_1
nSTAND_NTPase5
TniB
AAA_30
nSTAND3
AAA_5
NACHT
AAA_14
DAP3
MCM
Zeta_toxin
AAA_29
RsgA_GTPase
SLFN-g3_helicase
AAA_18
TIP49
KdpD
AAA_24
DUF815
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ASY08851
UniProt:
A0A249JWF7
LinkDB
All DBs
Position
1163400..1164770
Genome browser
AA seq
456 aa
AA seq
DB search
MAKAPAKDPFRCVECGWSATKWVGRCGECQAWGSVEEIAAPKKLSLVAGSVTSAAKPIGD
VDLASAKARSSGVGELDRVLGGGLVPGAAILLAGEPGVGKSTLLLTVAAETAKQGILSLY
ISGEESASQVRLRAERLNAIDKNLWLAAESDLGAVIAHIDSVKPELLVIDSIQTISSSTV
DGSPGGVTQVREIAAALIRIAKERSITLVLVGHVTKDGSIAGPRLLEHLVDVVLNFEGER
HSRLRLIRAIKNRFGASDEVGCFDLNDSGIVGLPDPTGLFTSRHSDPVPGTCVTVALEGR
RALLAEIQSLVSASNSDGRDWGNSRRVTSGLDNSRTAMTLAVLELRAGIKISGRDVYVAT
VGGMKITEPSADLAVALSVASAAKGLALPADLVAIGEVGLAGEIRKVTGITQRVAEAARL
GFKRAIVPVGSDLKIAGIEILEAARVEQAISKVKIN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcacctgcgaaagatccattccgttgtgttgagtgtggttggagtgccact
aaatgggttggtagatgcggtgaatgtcaggcttggggcagcgttgaagaaatagcagcg
ccgaagaaattatcacttgttgccggttcagtaacttcagctgccaaaccaattggtgat
gttgatttagcaagtgcaaaggctagaagcagtggtgttggtgaattagatcgcgtgctt
ggtggcggattagtaccaggagctgcaattttattagcgggtgaacctggtgttggtaaa
tcaacattgctactaacagttgcagcagaaactgctaaacaaggaattctttctttatat
atcagcggtgaagaatctgcttcacaggttagattaagagctgagcgtctaaatgcaatt
gataagaatttatggcttgctgcagaatctgatttaggcgcagtgatcgcccatattgat
tcagttaaacctgaattgctggtaattgactcaatacaaactatctctagctcaacagtt
gatggctcacctggcggtgttacccaagttcgcgagatcgccgcagccttaattagaatt
gctaaagagcgatcaataacattagttttagttggacatgtaacaaaagatggttctatc
gctggcccaagattgcttgagcatttagttgatgttgtccttaactttgaaggtgagcgt
cactccagacttagattaatcagagcgattaaaaatcgatttggtgcatctgatgaggtt
ggatgttttgatttaaatgactctggaattgttgggttaccagacccaactggtctgttt
acatctcgtcacagtgatccagtcccaggtacttgtgtaacagttgcgttagagggcaga
cgagcattactcgctgagattcaatcattagtaagtgcatcaaactcagatggacgtgac
tggggcaattccagacgagtaacaagtggattagataactcacgaactgcaatgacttta
gctgtattagagcttcgagcaggaattaaaatctcaggaagagatgtttatgttgcaacc
gttggtggcatgaaaattactgaaccatctgctgatcttgcagttgcactctcagtggca
tctgctgcaaaaggtttagcgctgccagcagatttagttgcaattggtgaggttggctta
gccggtgagattcgaaaagttactggaataactcaaagagttgcagaagctgcccgtctt
ggatttaaacgagcaatcgtgccagtaggaagtgatttaaagattgcaggtattgaaata
ctagaagctgctcgagttgagcaagcaattagtaaggtgaagattaactag
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