Candidatus Nanopelagicus limnae: B1s21122_00920
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Entry
B1s21122_00920 CDS
T05073
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02024
Quorum sensing
abam03060
Protein export
abam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B1s21122_00920
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B1s21122_00920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1s21122_00920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
abam02044
]
B1s21122_00920
Secretion system [BR:
abam02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B1s21122_00920
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Ortholog
Paralog
GFIT
Motif
Pfam:
SecY
NAT
Motif
Other DBs
NCBI-ProteinID:
ASY08929
UniProt:
A0A249JWM8
LinkDB
All DBs
Position
complement(1086934..1088229)
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AA seq
431 aa
AA seq
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MLAAFGKAFKTPDLRKKIIFTLSIMALFRLGSVIPTPGVSYVNVQECLATANTGGLFGLI
NLFSGGALLQLSVFALGIMPYITSSIIVQLLTVVIPRFEALKKEGQSGTAKLTQYTRYLT
IGLAILQSTGLIAVARIDGRIFPNCALPIIPDTSWQRIITMIAVMTAGTSVIMWLGELIT
DRGVGNGMSILIFTSIAATFPGQLWSIRLQKGWFAFLFIMAVGVLIVAAVVFVEQAQRRI
PVQYAKRQVGRQQYGGTSTYIPIKVNQSGVIPVIFASSLLYIPSLIVNFSGSQAGWATWV
SKNLVNGDNFFYIGVYAFLIVFFTYFYVAITFNPDEVADNMKQYGGFIPGIRAGKPTSEY
LQYVLSRITAPGALYLSIVAIIPFIALILFQASQNFPFGGTAILIVVGVGLDTAKQIESQ
LQQRSYEGFLR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgttagcagcatttggtaaggcatttaagacacctgatttgcgaaagaagataatcttc
actctttctatcatggccctatttcgattgggttcagtaattccaactcctggagtttcc
tatgtgaatgtgcaggagtgtttagcaactgcaaacactggtggcttatttggtttgatc
aacctatttagcggtggcgctttgcttcaacttagcgtttttgctctaggcatcatgcct
tacatcaccagctcaattattgttcagttgttaacagtagttatccctcgttttgaagct
ttaaagaaagagggacaatctggaactgccaagctaactcaatacacccgttacctaact
attggattggcaatcttgcaatcaactggcttaattgcggtggcaagaattgatggtcga
attttcccaaattgcgcactgccaattattcctgatacctcatggcaaagaattatcacc
atgatcgcagttatgactgctggcacatcagtaattatgtggttaggtgaattgatcacc
gatcgtggtgttggtaatggtatgtcgatcttaattttcacatcgattgctgcaacattc
ccaggacagctttggtccatccgcctacaaaagggctggtttgcattcctatttattatg
gcagttggagttttaatcgttgcagcagttgtgttcgtagagcaggcgcaacgtcgaatt
ccagtgcagtatgcaaagcgtcaagtaggacgtcagcaatacggtggaactagcacctat
attccaatcaaggtaaaccaatctggtgttatcccagtaatttttgcctcctcacttttg
tatatcccttctttgattgttaacttcagcggcagccaagctggctgggcaacttgggtt
tcaaagaacttagtaaatggcgataacttcttctatatcggcgtctatgcgttcttaatt
gttttcttcacctacttctatgttgcaattacctttaatccagatgaggttgccgacaac
atgaagcagtacggtggctttattccaggaattagagctggtaagccaacctctgagtac
ttgcaatatgtattatcaagaattactgcgccaggtgcgctttatctttcaattgttgcg
atcattccatttatcgcattaattttgttccaggcttcacaaaacttcccatttggtgga
actgctattttgatcgttgttggtgttggtctagatactgccaagcagattgaatctcaa
ctacaacaacgttcctatgaggggttcttgcgctaa
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