Candidatus Nanopelagicus limnae: B1s21122_01020
Help
Entry
B1s21122_01020 CDS
T05073
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02010
ABC transporters
abam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B1s21122_01020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1s21122_01020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_01020
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
B1s21122_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
BcrAD_BadFG
Motif
Other DBs
NCBI-ProteinID:
ASY08948
UniProt:
A0A249JWP2
LinkDB
All DBs
Position
complement(1070215..1071525)
Genome browser
AA seq
436 aa
AA seq
DB search
MIRNKSMKRAILASAIVATSAMVLSTVPAHADSTGVTATSIKLGVSTPLTGSAGLVYGKV
PGAMRAYFDYINANGGVNGRKISLVIRDDKYLPTLAATQTTNLILKDKVFALVGALGTAT
HSKAYTAAALAKNNVPDLFINTGFSGFTNKAKYPTTFMVLPTYNMEAKVMAKVIKDNFPG
QATFMIAQDDEFGSDGVAGFTTAGHKFTLSPTLYPQGTMTAARAEGALAALGAVPGKPVL
VLFGTTDVTAIILKAAEKLELTKKFTFLAGSVGADANTLLALGVKSTTIDGIVSASFMPD
AKDLTDPYVKQFIDINTKYNKGITFDNYVLAGMNSAMLTVQALRAAGKNLTRAGLMSAIE
AKGSTFASAGLVPLGYSATSRVGYNGYWVSQLNAKGEGKPYGGKLVVYTTDSGAGAVEVS
NFVRPTMPKNGIPTNS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaacaaaagtatgaagcgagcaatccttgcttcagcgattgtggcaacaagc
gccatggtgctcagcactgtgcccgctcatgccgattcgacaggcgtaacagcaacttcg
attaagttgggtgtttcaacccctcttaccggatcagctggacttgtatacggcaaggtg
ccaggagccatgcgcgcctacttcgactacatcaatgcaaatggtggagtaaatggtcgc
aagatctcactagttattcgtgatgacaagtacctgccaacacttgcagctactcaaacc
acaaacctaattttaaaggacaaagtttttgcactagttggcgcacttggaactgctaca
cactccaaggcttacacagcagccgctcttgctaagaacaatgttcctgatctatttata
aacaccggcttcagtggatttactaataaggctaagtacccaactacatttatggtgctt
ccaacgtacaacatggaagcaaaggtgatggcaaaggtaattaaggataatttcccaggc
caagccacatttatgatcgctcaagatgatgagtttggttcagatggtgttgcaggattt
acaacagcgggtcacaaattcacattatcaccaacactttacccacagggaaccatgact
gcagctagagctgaaggtgctcttgccgctcttggcgctgtaccaggaaagccagtattg
gttttgtttggaacaactgatgtgactgccataatcttgaaggcagcagagaagttagag
ctaactaagaagtttactttcttggcaggttcagtcggtgctgatgcaaacactctgctt
gcgctaggtgttaagtcaacaactattgatggcatcgtttctgcaagctttatgccagat
gcaaaggatctaactgatccatatgttaagcaattcattgatatcaacactaagtacaac
aagggaatcacctttgataactacgtacttgctggaatgaactcagcgatgctaactgtg
caggcactacgtgctgctggtaagaacctaactcgtgccggacttatgtctgcaattgaa
gctaagggatcaacctttgctagcgcaggattagttccacttggttattcagctactagc
cgtgttggttacaacggttactgggtaagccaattaaacgctaagggtgaaggaaagcca
tacggcggcaaactagttgtttacacaactgattcaggtgctggagcagttgaagtatca
aacttcgttcgtccaacaatgcctaagaatgggataccaacaaactcatga
DBGET
integrated database retrieval system
