Candidatus Nanopelagicus limnae: B1s21122_01050
Help
Entry
B1s21122_01050 CDS
T05073
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1s21122_01050 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abam03019
]
B1s21122_01050 (groL)
03110 Chaperones and folding catalysts [BR:
abam03110
]
B1s21122_01050 (groL)
03029 Mitochondrial biogenesis [BR:
abam03029
]
B1s21122_01050 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abam04147
]
B1s21122_01050 (groL)
Enzymes [BR:
abam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
B1s21122_01050 (groL)
Messenger RNA biogenesis [BR:
abam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B1s21122_01050 (groL)
Chaperones and folding catalysts [BR:
abam03110
]
Heat shock proteins
HSP60 / Chaperonin
B1s21122_01050 (groL)
Mitochondrial biogenesis [BR:
abam03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
B1s21122_01050 (groL)
Exosome [BR:
abam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B1s21122_01050 (groL)
Exosomal proteins of other body fluids (saliva and urine)
B1s21122_01050 (groL)
Exosomal proteins of breast cancer cells
B1s21122_01050 (groL)
Exosomal proteins of colorectal cancer cells
B1s21122_01050 (groL)
Exosomal proteins of bladder cancer cells
B1s21122_01050 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ASY08954
UniProt:
A0A249JWQ5
LinkDB
All DBs
Position
complement(1064014..1065648)
Genome browser
AA seq
544 aa
AA seq
DB search
MGKSLQFDEAARRAMERGVNILADTVKVTLGPKGRNVVIAKSYGAPLITNDGVTIAKEIE
LSDPAENMGAQLVKQVAEKTNDVAGDGTTTATVLAQAMVKEGLRNLAAGAQPMELKYGIE
QAVSAITEALRKNSTAVSGKSQIADVATISAQDKAIGDLIAEAMDKVGKDGVITVEESST
TGLELEFTEGMQFDKGYISPYFVTDSDRMETVLEDAYILISGQKISALSEILPVLEKVAQ
ASKPLLIIAEDVEGEALSTLVVNRMRGTFASAAVKAPGFGDRRKAMLQDIAILTGGQVIS
AEVGLKLEQIDIEMLGKARRIVISKDNTTIVDGAGNKNDVASRVTEIRREIENTDSDWDR
EKLQERVAKLAGGVCVIKVGAHTEVELKEKKHRLEDAISATRAAVEEGIVVGGGAALVHA
AAALDNDLGFEGDRAVGVRLVRKACDEPLRWIAENAGQEGYVVVSKVRAMKPNEGFNAYS
ETYTDLVKEGVIDPVKVTRSALANAASIAAMFITTEALVFETPEEKKEEAAGHGHSHGAG
GHSH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcacttcaatttgatgaagcagcacgtcgtgcgatggagcgcggcgtaaac
attcttgccgataccgtcaaggtaacacttggacctaagggtcggaatgtcgtaattgca
aaaagctacggcgcaccattgattacaaatgatggcgtgacaattgctaaagagattgag
ttatcagatcctgcagaaaacatgggcgcccaacttgttaagcaagttgcggagaaaact
aatgatgtcgcaggtgatggcacaactactgcaactgtattagctcaagcaatggtgaaa
gagggcctacgcaatcttgcggcaggtgctcaaccaatggagcttaaatacggaattgaa
caagcagtatctgcaattactgaagcattgcgaaagaattcaactgcagttagtggaaaa
tctcagattgcagatgttgcaaccatttcagcccaggacaaagctattggtgatttaatc
gctgaagcaatggacaaggttggcaaagatggtgtgatcactgttgaagagtcatcaact
actggacttgagcttgagttcactgaaggtatgcaatttgataagggttatatctctcct
tactttgttactgattcagatcgcatggaaacagttctagaggatgcatacattcttatt
tctggtcagaaaatctctgcattaagtgagatcttgccagtactagaaaaagttgcccaa
gcaagcaaaccacttttgatcattgccgaggatgttgaaggtgaagcactttcaactttg
gttgttaaccgcatgcgtggcacatttgcctcagctgcagttaaagcacctggctttggt
gaccgtcgtaaggcaatgttgcaagatattgcaatccttactggtggacaggttatctct
gctgaggttggcctaaagcttgagcaaatcgatattgaaatgcttggtaaagcacgtcga
attgttattagtaaagacaacaccacaattgtggatggtgctggtaataaaaatgatgtt
gcatcccgcgttacagagattcgccgcgagattgaaaacaccgactctgattgggatcgc
gaaaaactacaggagcgagttgcaaaacttgctggtggagtttgtgtgatcaaagttggc
gcccacactgaggttgagttaaaagagaagaagcaccgtcttgaagatgctatctctgca
acaagagctgcagttgaagagggaattgttgttggcggcggcgcagcattagtacatgca
gcagcagcccttgataatgatttgggctttgaaggagatcgcgcagttggtgtgcgtctt
gttcgtaaagcatgtgatgaaccacttcgttggattgcagaaaatgctggccaagaaggt
tatgttgtagtttcaaaggtgcgcgctatgaaaccaaatgaaggtttcaacgcttactca
gagacttacacagatcttgtaaaagagggcgtaattgatccagttaaggtaactagatca
gcgctagctaatgctgcatctattgctgcaatgttcattacaactgaagccttagttttt
gaaactccagaggagaaaaaggaagaggcagcaggtcatggccactcacacggagcaggc
ggacactctcactaa
DBGET
integrated database retrieval system
