Candidatus Nanopelagicus limnae: B1s21122_01710
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Entry
B1s21122_01710 CDS
T05073
Name
(GenBank) peptide/nickel transport system substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1s21122_01710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_01710
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B1s21122_01710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASY09073
UniProt:
A0A249JX21
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All DBs
Position
complement(945848..947626)
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AA seq
592 aa
AA seq
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MRRNAISTRVLAALSVGALVSTVITVGATSSANAATPKAGGTLYLLEHTPRLDHYDPSRI
YTGRDLAFMNSFHTRTLVAYNPVPGDKGADLVPDLATNTGIPSNQAKTWKFTLRPGTTFE
DGVAITCEHVKYGSSRVFATDVISDGPQYLVSWLDIPKNADGTSIYTGPYKNTPAGVAAF
NKAVTCSGRTITFNLNKSIADFNYLATYGVISPVQKKKDTGDKYDLNPQATGPYKIVENS
NTQLRMVRNTKWNKSSDTVRTPYPDEVIIQFGLDEEVIDQIILEDSIPNAVNFGGPLPTN
RDKFFKDAKFANRRMNNSDPYARYFAFNLAKMPCLEIRQAMYYVRDAKALLDYAGGPDYA
GSYATGVISPLLATDFAATKVVGPSDHKNTADVLDATTGFKPSGNVAKAQALMDAAKTKC
PADHAKATTEGITFDVSQSSTLNDTIPINEKAFARVGIKVNYNIIKSGYYPTVMTASKQS
DLSTSGWGADWANASTVIPELFTTAGGFNLSQNSKDPAYKAFEDKVNLAMKTTDRKKQAA
LWKELDKEAMKNFWVLPTLFGKAQEVWGSKVQNVFFWVPQGNPAYGKMWINQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagaaatgcaattagcactcgcgtgctagctgctctttctgtaggtgcactcgtc
agcacagtaattactgttggcgcaacatcttcagcaaatgcagcaacaccaaaagctggc
ggaacgctttatttattagagcacacaccacgccttgatcactacgatccatccagaatt
tatactggccgagatctagcgttcatgaactcattccacactcgaacacttgttgcttac
aatccagttccaggtgataagggagcagatcttgttcctgaccttgcaactaacactggt
atcccaagcaatcaagctaagacttggaagttcacactacgtccaggaactacatttgaa
gatggcgttgcaattacctgtgagcatgttaagtacggctcatcacgtgtattcgctaca
gatgtaatctctgacggacctcaatacctagtttcatggctagatattccaaagaacgca
gatggaacatctatctataccggtccatacaagaacaccccagctggtgttgcagctttc
aataaggctgttacttgttcaggccgtaccatcactttcaatctgaacaaatcaattgct
gactttaactacctagcaacttatggagttatctcaccagttcagaagaagaaggacact
ggcgataagtatgaccttaacccacaggcaactggcccatacaagattgttgaaaacagc
aatactcaacttcgtatggttcgtaataccaagtggaacaagtcatctgacaccgtccgt
actccatatccagatgaggtaattatccaattcggtttggatgaagaagtaatcgaccag
attattttggaagattcaattccaaatgctgttaactttggtggaccacttccaactaac
cgcgataagttcttcaaggatgcaaaattcgctaaccgtcgtatgaacaactctgaccct
tacgctcgctactttgcatttaaccttgcaaagatgccatgtcttgagattcgtcaggcg
atgtactacgtacgtgatgccaaggcacttcttgattatgccggtggtccagattatgca
ggttcatatgcaaccggtgtaattagcccacttcttgcaacagatttcgcagcaactaag
gttgttggaccatctgatcacaagaacacagctgatgtactagatgccacaacaggcttc
aaaccatcaggtaacgtggcaaaggctcaagcattgatggatgcagcaaagactaagtgt
cctgctgatcacgccaaggcaaccacagagggcatcacattcgatgtgagccagtcatca
actcttaatgacactattccaataaacgagaaagcatttgctcgtgttggaattaaggtt
aactacaacatcatcaagagtggttactacccaacagttatgactgcttcaaagcagagt
gatctatcaacttcaggctggggagctgactgggctaacgcctcaacagttattcctgag
ctattcacaactgcaggtggatttaacctaagccagaactcaaaagatcctgcctacaag
gcatttgaggacaaggtaaatcttgcgatgaagacaactgatcgtaagaagcaggcagca
ctatggaaagaactagataaagaagcaatgaagaacttctgggtactaccaacattgttt
ggtaaggctcaagaggtttggggctcaaaggtccaaaacgtcttcttctgggttccacag
ggaaatcctgcatacggcaagatgtggattaatcaataa
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