Candidatus Nanopelagicus limnae: B1s21122_01785
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Entry
B1s21122_01785 CDS
T05073
Name
(GenBank) DNA repair protein RecO (recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1s21122_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_01785
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1s21122_01785
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1s21122_01785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ASY09086
UniProt:
A0A249JX48
LinkDB
All DBs
Position
complement(928590..929330)
Genome browser
AA seq
246 aa
AA seq
DB search
MPLYRDHAIVLRTQKLGEADRIITLFTKEHGRIKAVAKGVRRTKSRFGARLEPASYVDLQ
LYTGRTFDTITQVVSIENYGDVLSSDYQSWTVASAILEAAERFTLAEHEPALQQFILVSG
SLKALAEKKYDASLILDAYLLRSLAVAGYAPSLTLCSRCDAPGPHKFFSLQGGGSVCPTC
KPSASAAPSQATLDLMAHLLTGDWEQAVRSESKNRNEASGLIAAYLQWHLERGLRSLPLV
ERISRG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcctttataccgcgatcatgcgattgtgctgcgcacccaaaagttaggggaggcagat
cgcattatcaccttgttcactaaagaacatggccgaattaaagcggtagcaaagggagtt
cgcagaactaaatctagatttggtgccaggcttgagccagctagttatgttgatcttcag
ttatataccggccgcacctttgacaccataactcaggttgtaagtattgaaaattacggt
gatgtcttatctagtgattaccaaagttggactgttgctagcgcaattttagaagctgct
gagcgctttaccttagctgagcatgaaccagcgctacagcaatttatattagttagtgga
tcactaaaagctttagctgaaaaaaagtatgatgcatctttgatattagatgcctacctt
cttagatcattagcagtggcaggatatgcaccctctttaactctttgctcaagatgtgac
gcacctggtccacataaatttttctcactgcaaggtggtggctcagtatgtccaacctgt
aaaccatcagcctcggccgccccatcccaggcaactctagatttaatggcgcatttatta
acgggggattgggagcaagcggtaagaagtgagagtaagaatagaaatgaggcatcaggt
ttaattgccgcctacctgcagtggcacttagagcgaggcttacgttccctgccattagtt
gagagaataagtcgtggttaa
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