Candidatus Nanopelagicus limnae: B1s21122_01960
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Entry
B1s21122_01960 CDS
T05073
Name
(GenBank) ribose transport system substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B1s21122_01960
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
B1s21122_01960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_01960
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
B1s21122_01960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
NMT1_2
Motif
Other DBs
NCBI-ProteinID:
ASY09118
UniProt:
A0A249JX61
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All DBs
Position
complement(897443..898492)
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AA seq
349 aa
AA seq
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MKKSLLASLAAVALLVTGCSSSSDSAGGDGEFGSIKVALVPGGAHPYFQPWKDGGAAAVS
EFGIGGTEFNETGEWDQTKHNAAIDAMAAQGYNAFGVFGVSPTDINTTFAGLKAKGFAVG
SLASCPGGYDIVKEPQKNSADFCLSTDTGKAAYLAATAVIKEMGGKGNLVHLTGNAVDAN
TIRRMDGVKQAIAETGGKVKLLTTITDIDSDLQSATKAVTDLLAAKGKQINGIVTTAYNP
AVAATDGVASTKLPIKVIAIDDDQKILDAIKSGVISGTVVQNPWGQGYVGSWVLSALGTK
KCTMNTPGLYVDSGSFLVTKDNVDTYNDTRQATSKEILTAFQNEYMTCK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcattacttgcgtcactggcagcagttgcgctacttgtaacaggttgttca
agttcatctgactctgcaggcggagacggagaatttggttcaatcaaggtagcacttgtg
ccaggtggagctcacccttacttccaaccatggaaagatggcggagcagccgctgtatct
gaattcggaattggcggaacagaattcaacgagactggtgaatgggatcaaaccaagcac
aatgcagcaatcgatgcgatggcagctcaaggctataacgcatttggtgtattcggtgtt
tcaccaacagatatcaacaccacatttgctggactaaaggcaaaaggattcgcagttggt
tcccttgcttcatgcccaggtggatatgacattgttaaagagccacagaaaaactcagca
gacttctgcttgagcactgatactggcaaagctgcataccttgcagcaactgcagttatt
aaagagatgggtggcaagggaaatcttgttcacttaactggtaacgcagtagatgcaaac
acaatccgtcgtatggatggtgttaagcaagcaatcgcagagactggtggaaaagtaaaa
cttctaaccacaatcactgacattgactcagatctacagtcagctacaaaggctgtaaca
gatcttctagcagcaaagggcaagcagattaacggcatcgttacaactgcttacaaccca
gctgttgctgcaactgatggagttgcatcaactaagcttccaatcaaggttattgcaatt
gatgatgaccaaaagatcttggatgcaattaagtctggtgtaatttctggaacagttgtt
cagaatccttggggacaaggttatgttggatcatgggttctttcagcacttggaactaag
aagtgcaccatgaatacacctggtctatacgtagactccggttcattcttggtaacaaag
gacaacgttgatacctacaacgacacacgtcaagctacttcaaaggaaatccttacggct
ttccagaacgagtacatgacctgtaagtaa
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