Candidatus Nanopelagicus limnae: B1s21122_02280
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Entry
B1s21122_02280 CDS
T05073
Name
(GenBank) rhamnose transport system ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B1s21122_02280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_02280
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
B1s21122_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_30
RsgA_GTPase
DUF592
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASY09932
UniProt:
A0A249JZK7
LinkDB
All DBs
Position
complement(835449..836954)
Genome browser
AA seq
501 aa
AA seq
DB search
MAAKGDLLLEMSGVQKRFGGAVALKGTDLKIRAGEIHALLGENGAGKSTMLKILSGVHVN
DGGSIKLGGKDFITGSPQASIDQGVAVIYQEPSLFLDLSLAENVFIGRQPKKGMVIDWKF
AQSEAKRLFKELGVELDPKRQARGLSIADQQVVEIAKALSMNANIILMDEPTAALSASEV
ERLMTVMKSLKAANKAVIFVSHRLDEVFAISDFITVMRDGATVSENPVGKTDLQKVIKEM
VGRELTELFPKTENKIGAVVLEVKDLTNPAYFRNVSFNVKKGEIVALAGLVGSGRSEVAR
AIFGVDKYESGSVTLNGKALPAGSPVEAMKRKIALVPEDRRQQGLFMVAGVNRNISMESF
DKLTDRGLINFKREKTLTNTWKEKLSIKFANQADPVDRLSGGNQQKTVLAKWLATDPDLL
IVDEPTRGIDVATKAEVHRLVNQAASEGKAVLMISSELPEVLGMADRIIVMREGKQVAEL
SRKEATQEKIIAAATTGKRSA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtggccgctaagggtgatctactacttgaaatgagtggagtgcaaaagcgctttggtggc
gcagttgcattaaagggaacagatctaaaaattagagcaggtgagattcacgcactcctt
ggtgaaaatggcgcgggtaaatccacgatgcttaagattttgtctggcgttcatgtcaat
gatggtggctcaatcaaattaggtggcaaagattttattaccggatccccgcaagcatcc
attgatcaaggtgtggcagttatttatcaggagccatcccttttcttagatctatcttta
gctgaaaatgtttttattggtcgccaacctaaaaagggaatggtgattgattggaagttt
gcccaaagtgaggcaaagcgattatttaaagagttaggtgtggagttagatccaaagcgg
caagctcgtggtctttccattgcagatcaacaagttgttgagattgcaaaggcgttatcc
atgaatgcaaatattattttaatggatgagccaacagcagccctttcagcttctgaagtt
gagcgattgatgacagttatgaaatcacttaaagctgctaataaagcggttatctttgtt
agccacaggttggatgaagtatttgcaatctctgacttcattaccgtaatgcgagatggc
gcaactgtgagtgagaatccagttggtaagactgatctgcaaaaggtaattaaagagatg
gtgggaagagagttaactgagctatttccaaagacagagaacaagattggcgcagtagta
cttgaggttaaagatctaacaaatcctgcctactttagaaatgtttcatttaatgttaaa
aaaggtgagattgtggcccttgctggcttagttggctcaggccgatcagaggttgcaaga
gcaatctttggtgttgataagtatgaaagtggctcagtaactttaaatggtaaagccctt
cctgctggctcaccagttgaagcgatgaagcgcaagattgcattagttcctgaggatcgc
aggcagcaaggattgtttatggtggctggagttaatcgaaatatctcaatggagtccttt
gataaattaactgatcgtggcttaattaactttaagcgcgagaaaactttgactaatact
tggaaggaaaaactaagtattaagtttgcaaaccaagcagatccagttgatcgtctttca
ggtggtaatcaacaaaagacagtattggctaagtggcttgcaacggatcctgatctatta
attgttgatgagccaactcgcggtattgatgttgctacaaaggcagaggttcaccgcttg
gtaaatcaagcagccagtgaaggtaaagcagttttgatgatctcatctgaacttcctgaa
gtattaggaatggcagatcgaattattgtgatgcgtgaaggcaagcaagttgccgagcta
tctcgtaaagaggcaacgcaggagaagataattgcggctgcaactaccggaaagcgaagt
gcttaa
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