Candidatus Nanopelagicus limnae: B1s21122_02285
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Entry
B1s21122_02285 CDS
T05073
Name
(GenBank) rhamnose transport system permease protein
KO
K10560
rhamnose transport system permease protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B1s21122_02285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_02285
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
B1s21122_02285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
FAXC_N
Motif
Other DBs
NCBI-ProteinID:
ASY09180
UniProt:
A0A249JXD4
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All DBs
Position
complement(834449..835456)
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AA seq
335 aa
AA seq
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MLNMNFLKKLRPSSRESSLFIILLVAVGGTGLINPRFLTGDGTRDLLTSTSVVALLAIGI
APIVVMRHIDLSIASTVGLSAWTVADFCAKNPSFTWVQCFVIGSVIGLAVGIVNGLLVAG
LRLPSLVVTLGTLYIVRGLVYVVSNSVDYNAQEMPESLLALGQKVYFGLLPFTFLMVIIA
MILMALFMKYTKSGRDAYAIGSNPPAADLVGLKVFRRTFLAFVFSGVMSGIAGVFYLMRF
AQVDSTAFYGQELAVVAAVVIGGVTIMGGSGTVVGAVIGALLVQTIQGGLAALGVDAFWK
AAINGLLLIIAIYADRVLAVRNEKQLLAQRIRERI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaatatgaacttcttaaaaaaacttcgtccatcaagccgggaatcaagtcttttc
attattttgcttgtcgcagttggcggcaccggattaattaacccacgatttttaacaggt
gatggcactagagatcttctaacctcaacctctgttgtggcgctccttgcaattgggatc
gcaccaattgtggttatgcgccatattgatctatcaatcgcttctaccgttggcttatct
gcttggacagttgcagatttttgtgcaaaaaatccaagctttacctgggtgcaatgcttt
gtgattggttcagttattggccttgcagtaggtattgtaaatggcttacttgtggcaggg
cttagattgccttcattggtggtaacgctaggaactttatatattgtgcgcggtttggtt
tatgttgtatcaaactcagttgattacaacgcacaagagatgccagagagcttgttagca
cttggccaaaaggtttactttggtctgctgcccttcacattcttaatggtaattattgca
atgatcttgatggccctctttatgaagtacacaaagtcaggcagagatgcttatgcaatt
ggatctaacccaccggctgcagaccttgttggcttaaaggtattccgtcgcacattccta
gcatttgttttctcaggtgttatgtctggcattgctggcgtgttttatttaatgcgattt
gcccaggttgactccaccgctttttatggccaggagttagcagttgttgcagccgttgta
attggtggcgtaacaattatgggtggatctggaactgtagtaggagctgtaattggcgca
ttacttgtgcagacaattcaaggtggcttagcagcccttggcgttgatgcgttctggaag
gcagcgattaatggtttgctattaattattgcaatctacgccgatcgagtactggcggta
agaaatgagaaacaattgctggcgcaacgaataagagagaggatttag
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