Candidatus Nanopelagicus limnae: B1s21122_02290
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Entry
B1s21122_02290 CDS
T05073
Name
(GenBank) rhamnose transport system permease protein
KO
K10561
rhamnose transport system permease protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B1s21122_02290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abam02000
]
B1s21122_02290
Transporters [BR:
abam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
B1s21122_02290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ASY09181
UniProt:
A0A249JXC8
LinkDB
All DBs
Position
complement(833460..834446)
Genome browser
AA seq
328 aa
AA seq
DB search
MSKFAKLGSVRRSWDTAIIGLLLLVWVFASLTTSNFLTPLNFSYIFSNTSEIMIIAFAML
FMIILGEIDLSVASILALGSSMLGWSYAKGAPIWMAILICILVGTACGFVNGFLVTKLGL
GSLAVTIGTLALYRGIANGLLGENTVNEFPEFWTSFGFDTIGKSFMPKTLPLIIIFGILF
GLLLHKTPFGRRTLAIGQSPEAAKFAGVNVVRHKMIVFTFTGFMSGVAGVIYTFRFSTAQ
ADNGVGLELLVISAILLGGVSIFGGIGTMWGVVAGVLLAGSVESWLTLQEINAQWRTIVT
GILLLISVAAPVLVQKGKARRELKALKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatttgccaagttaggttcagtaagacgcagttgggatactgcaattattgga
ctacttctacttgtttgggtttttgcctcactcaccacctcaaactttctaactccactt
aacttctcctacatcttctctaatacttcagagatcatgatcatcgcctttgctatgtta
tttatgattatcttgggcgagattgatttatctgttgcatccatcttggcactaggaagt
tcaatgcttggttggagttatgccaagggagcaccgatttggatggcaatacttatctgt
attttggttggaacagcctgtggttttgttaatggattccttgttacaaagttaggtttg
ggttcattggctgtaaccattggaacactggcgctataccgcggtattgcaaatggtcta
cttggtgagaacaccgtaaatgagttcccagagttttggacaagctttggttttgacacc
attggtaagtcatttatgccaaagaccttgccattaattattatctttggaattttattt
ggtctacttctacacaagacgccatttggtcgtcgcacattagctattggtcaaagccca
gaggcagccaaatttgctggtgttaacgtggtcagacacaagatgattgttttcaccttc
actggctttatgtcaggtgttgcaggagttatctacacattccgcttctcaactgcccaa
gctgataatggtgttggtcttgagttattagttatctctgccatcttgttaggtggagtt
tcaatatttggtggaattggaaccatgtggggagttgtcgcaggtgtattacttgctggc
tcagttgaatcttggttaacactgcaagagatcaacgcacaatggcgaacaattgttacc
ggtattttgcttttgatctcagttgcagcccctgtattggtgcaaaaaggtaaagcacga
agagagcttaaagctttaaaaagctag
DBGET
integrated database retrieval system
