Candidatus Nanopelagicus limnae: B1s21122_02805
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Entry
B1s21122_02805 CDS
T05073
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03030
DNA replication
abam03430
Mismatch repair
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1s21122_02805
03430 Mismatch repair
B1s21122_02805
03440 Homologous recombination
B1s21122_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abam03032
]
B1s21122_02805
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_02805
Enzymes [BR:
abam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1s21122_02805
DNA replication proteins [BR:
abam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1s21122_02805
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1s21122_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASY09280
UniProt:
A0A249JXM9
LinkDB
All DBs
Position
728711..729346
Genome browser
AA seq
211 aa
AA seq
DB search
MSTLLQETTFVVVDLETTGASPKKGAAITEIGAVKVQGGQIIGEFKTFVNPLAPIPLYIT
EMTGITDLMLAKAPIIDEVFPTFLEFAGSHNQTVLVAHNAPFDLAFLKSAAKDLNYAWPT
YKTLDTVTVARQVLTKEDVPDCKLGTLAQFFGTKTEPNHRALDDAKATVEVLHGLFERLG
SLEITTLEGLLDFAKTAAHIQRKNYWGLSSI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattgctgcaggaaaccacctttgtagttgttgatctagaaaccaccggtgct
tcaccaaaaaaaggtgcagcaattaccgagattggagcagttaaagttcaaggtggccag
atcattggtgagttcaaaacctttgtaaatccgttggcgccaattcctctctacataact
gagatgactggcataactgatctaatgctggcgaaagcaccaataatcgatgaggtattt
ccgacttttctagagtttgcaggcagccacaatcaaactgttttggtggcacataacgct
ccatttgatttagcctttttaaaaagcgccgctaaagatttaaattacgcatggcccact
tataaaaccttggacactgttacggtggccagacaggtgctcaccaaagaggatgtacca
gattgtaaattgggaactcttgcgcaattttttggaactaagacagaacccaatcaccga
gctctagatgatgccaaagcaacggttgaggttttacatggattatttgagcgacttggt
tcacttgaaattactacattagagggattactggattttgctaaaactgctgcacatatc
caacgtaagaattattggggtttatcctctatctag
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