Candidatus Nanopelagicus limnae: B1s21122_02990
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Entry
B1s21122_02990 CDS
T05073
Name
(GenBank) pyridoxal 5'-phosphate synthase pdxS subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00750
Vitamin B6 metabolism
abam01100
Metabolic pathways
abam01240
Biosynthesis of cofactors
Module
abam_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
B1s21122_02990
Enzymes [BR:
abam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
B1s21122_02990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
IMPDH
Glu_synthase
FMN_dh
Trp_syntA
DHO_dh
TMP-TENI
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
ASY09310
UniProt:
A0A249JXR5
LinkDB
All DBs
Position
complement(695166..696053)
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AA seq
295 aa
AA seq
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MSKETGTARVKRGMAEMLKGGVIMDVVNVEQAKIAEDAGAVAVMALERVPADIRAQGGVA
RMSDPDMITAIQAAVSIPVMAKARIGHFVEAQVLQTLGVDYIDESEVLTPADYANHIDKW
NFTIPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRTISAEIRRLTSMRE
DELFVAAKELQAPFDLVKEVASTGKLPVVLFTAGGIATPADAAMMMQLGADGVFVGSGIF
KSGDPAKRAAACVKAVTYFTDAKVVAEVSRGLGEAMVGINVADIPVPHRLAERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaacaggcacagcacgagtaaaacgcggcatggcagaaatgcttaagggc
ggcgtgattatggatgttgtaaatgttgagcaggccaagattgcagaagatgctggcgct
gttgcagtaatggcgctagagcgcgtacctgcagacattcgtgcccaaggtggcgttgct
cgtatgtcagacccagacatgataactgcaattcaagcagcagtttcaattccagttatg
gcaaaggcaagaatcggacattttgttgaagcacaagttttacaaacactgggcgttgat
tacatcgatgagtcagaggttttaactccagcagattatgccaaccacattgataaatgg
aatttcacaattccgtttgtatgcggtgccacaaatctgggagaggcacttcgcagaatt
aatgaaggcgctgccatgatccgatctaaaggtgaagcaggaactggtgatgtttcaaat
gcaaccactcatatgcgaactatctcagcagagattcgccgtttaacatcaatgcgtgaa
gacgagctttttgttgcggcaaaggaattacaagccccatttgatttagtaaaagaggta
gctagtactggaaagctaccagttgttttattcactgctggcggaattgcaacacctgct
gatgcagcaatgatgatgcaattaggagcagatggagtatttgttggttcaggtatcttt
aaatctggagatcctgccaagcgtgctgcggcatgtgtgaaagctgttacttacttcacc
gacgcaaaagttgtggccgaagtttctcgtggtttgggtgaagcgatggttggtataaat
gttgctgatattcctgtgccacaccggttagcggagcggggctggtaa
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