Candidatus Nanopelagicus limnae: B1s21122_03010
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Entry
B1s21122_03010 CDS
T05073
Name
(GenBank) holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1s21122_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_03010
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1s21122_03010
RecFOR pathway proteins
B1s21122_03010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_2
BREX_PglY_6th
Motif
Other DBs
NCBI-ProteinID:
ASY09314
UniProt:
A0A249JXR0
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Position
complement(692649..693236)
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AA seq
195 aa
AA seq
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MISSVTGTVKSTSINSIVVEVGGVGVLLQVPIRIAAKIQSGEKVSFHTYLIVREDALTLY
GFTEILDRDFFELLLSVTGIGPKVAQSILANSDAGTIANAVVSSNLKTLESVPGLGKKGA
QRLVLELKDKAAAFAGGKVGSNLATSNQVENALQGLGYSSKEAGAMLNQVMKEEKIEGLS
AAQILKLALKSSGKQ
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgattagctcagtaactggaaccgtcaaatcaacctcaattaattcaattgtggttgaa
gttgggggagttggcgtccttttgcaggtgccaatcagaattgctgcaaaaattcaaagt
ggtgagaaggtcagctttcacacttatttaattgtgcgtgaagatgccttaacactttat
ggatttactgaaattttagatcgagatttttttgaattacttttatcagttaccggaata
ggtcctaaagttgctcaatcaattctggcaaatagtgatgcgggcacgattgccaatgct
gtggtttcatctaatttaaaaactttagagtcagttcccggattaggcaaaaaaggtgct
caacgtttagtgcttgagttaaaagataaagcagcggcctttgccggcggcaaagtaggt
tctaatcttgcaacatcaaatcaagtagaaaacgcactgcaaggtcttggttactccagt
aaagaagcgggggcgatgcttaaccaagtaatgaaagaagaaaaaattgaaggattaagc
gctgcgcaaatactcaagttagctcttaaaagctctggaaagcaataa
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