Candidatus Nanopelagicus limnes: B1s21122_03140
Help
Entry
B1s21122_03140 CDS
T05073
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam00220
Arginine biosynthesis
abam00240
Pyrimidine metabolism
abam00250
Alanine, aspartate and glutamate metabolism
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
abam01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
B1s21122_03140 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B1s21122_03140 (carB)
00220 Arginine biosynthesis
B1s21122_03140 (carB)
Enzymes [BR:
abam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
B1s21122_03140 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_3
RimK
ATP-grasp_2
ADH_zinc_N
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASY09340
UniProt:
A0A249JXU5
LinkDB
All DBs
Position
complement(663862..667113)
Genome browser
AA seq
1083 aa
AA seq
DB search
MPKDNSIKSVLVIGSGPIVIGQACEFDYSGTQACRVLRAEGIRVILINSNPATIMTDPEF
ADATYIEPITPEVIEMILDKERPDAVLATLGGQTALNAAMALHERGSFVKYGTKLIGADV
EAIKRGEDREVFKKIVESIGGQSAKSKICHSMQDCLAAALELKYPVVVRPSFTMGGLGSG
IAYNESDLQQIAGAGLRHSPTTEVLLEESIIGWKEYELEVMRDNNNNVVIVCSIENVDPM
GVHTGDSITVAPTMTLTDVEYQKLRDLSIKIIREVGVATGGCNIQFAVNPADGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLAIGYTLDEIENDITKSTPASFEPALDYVVVKVPR
FAFEKFPEADTRLTTTMKSVGEAMAIGRSFPEALQKALRSLEKVGASFKWRTENLSELLG
KIVVPTEFRLQQVQSALFNGATVDEVFKITKIDPWFLEQIRLINDQASLIANSGELTREL
LKSSKMMGFSDAQIAELRKTNESEVRQMRSNLNLHPVYKTVDTCAGEFAALTPYYYSAYD
EESEVLSRSKPAVIILGSGPNRIGQGIEFDYSCVHASFALQKAGYETIMINCNPETVSTD
YDTSDRLYFEPLTLEDVLEVIAAENAAGPVLGVIAQLGGQTPLGLARGLLDAGVKILGTS
PDAIDLAEERGAFGEILSKNDLSAPNFGMANSYQESSEIATRIGYPVLVRPSYVLGGRGM
EIVYDEESLRGFIEKATAITPNHPVLIDKFLDDAIEIDVDALYDGSDLYLAGVMEHIEEA
GVHSGDSACVLPSTSLDKNMLDQIRIATEKIAKDVGVRGLINIQFAVSGDPQKLFVLEAN
PRASRTVPFVAKATGVQLAKAAALIATGVSIAQLRIDALLPKSGDGKANGVSVKEAVLPF
NRFRRIDGTGVDTVLGPEMKSTGEVMGIANNFGLAFAKSQIAAFGPLPISGAVFISLSQR
DKDSGWRSARGLHELGFKIYSTAGTHSYLTEKGIPSEKVRKNSDPQTDQLSANDLITKGL
VQLVINTPLGRGSRQDGFLIRTAAISRSVACITTIPGFKAAVAGISALQKDEFGIKSLQE
WMQ
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagataattcaattaagagtgtattggtaattggtagtggaccaatagttatc
gggcaagcttgtgaatttgactattcaggtactcaagcttgtcgggttttacgggcggaa
gggattcgtgtaatcctcattaattctaatcctgcaacaattatgacggatcctgaattc
gctgatgcaacatacatcgaaccaattacgccagaagttatagagatgattttggataaa
gaacgtccggacgcagtgctggcaacattaggtggacaaactgcactaaacgctgcaatg
gcccttcatgagcgaggttcttttgttaaatatggcaccaaattaatcggtgcggatgtt
gaggcaattaaacgaggtgaagatcgcgaagtgtttaaaaagatagttgaaagtatcggt
ggacaatcagcaaaatcaaagatttgccattcaatgcaagattgtttggcagctgcttta
gaacttaaatatccagttgttgtgcgtccttcattcactatgggtgggttgggttctgga
attgcttataacgaatcagatctgcaacaaattgctggagctggtttgcgacatagtcca
accactgaagtactacttgaagaatcaataattggatggaaagaatatgagttagaggtt
atgcgagataacaataacaatgttgtaatagtttgcagcattgaaaatgttgacccaatg
ggagtccatacaggagattcaataacggttgctcctactatgactttaaccgatgttgag
tatcagaaattgcgtgatctttctataaagatcattcgagaggttggggttgccactgga
gggtgcaatattcaatttgcagttaatcctgcagacggtcgaatcattgttatcgagatg
aatccacgagtttctcgatcatcagcacttgcctcaaaagcaactggttttccgattgca
aagattgcaaccaagttagcaattggctatacattagatgaaatcgaaaatgatataact
aaatcaacaccagcatcatttgagccagcattggattatgtagttgtgaaagttcctaga
tttgcttttgagaagttcccagaggctgatacacgtttaacgaccactatgaaaagtgtc
ggtgaagccatggcgattggccgaagttttccagaagctctacaaaaagctctacgctcc
ttagaaaaagtaggcgcatcctttaaatggcgcacagagaatctttctgaattgcttgga
aagattgttgtgccaactgaatttcgattgcagcaggttcaatcagctctatttaatggc
gcaacagttgatgaagtttttaagataactaaaattgatccctggtttctagagcagatt
aggctgataaatgatcaagcttccttgattgcaaactctggagaattaacaagagagctt
ttaaaatcatcaaaaatgatgggtttttcagacgcacaaattgcagaactaagaaaaacc
aatgaatccgaagttcgtcagatgagaagtaatttgaatcttcaccccgtctataagact
gtcgatacctgtgctggtgaattcgcagctcttactccgtattactactctgcttatgat
gaagagagtgaagtgttatctaggagtaagccagcggtaatcattcttggtagtggacct
aatcgaataggtcaaggaattgaatttgattactcctgtgttcatgcatcatttgccttg
caaaaggcaggctatgaaacaattatgattaattgcaatccagaaactgtttcaacggat
tacgacacttcagatagattgtattttgagccactaactctagaagatgtgttagaagta
attgctgccgaaaatgcagctggcccagttctaggagtgatcgcacaattgggaggtcaa
actccattaggtcttgctcgcggtttattagatgcgggcgtgaaaattcttggcacctca
cctgatgcaattgatttggcggaagagcgtggtgcctttggtgagattctcagcaagaac
gatttaagtgcacctaattttggaatggctaattcttatcaagaatcttctgagattgcc
acaagaatcggctacccagtactagtaaggccatcttatgttctaggcgggcgaggcatg
gagattgtttatgatgaggaatctctgcgaggttttattgaaaaagctaccgccatcacg
ccaaaccatccagtattaattgataagtttttagatgatgcaatcgaaatagatgtagat
gctctttatgatgggtcagatctgtatttagctggagtgatggagcatattgaagaggct
ggtgttcattcgggcgattctgcttgcgttctaccaagtacttcacttgataaaaatatg
ttggatcagatacgaattgccaccgaaaaaattgcaaaagatgttggcgtcagagggttg
atcaatattcaattcgccgtaagtggagatcctcagaaactgtttgttttagaggcaaat
ccaagagcgtcaagaactgtgccatttgttgcgaaagcaactggtgtccaattagccaag
gctgctgcgttaattgcaactggggtcagtattgcccaacttcgcatagatgctctttta
ccaaagagcggtgatggaaaagcgaatggagtgtccgtgaaagaggcggttctaccattt
aatcgattccgcagaatagatggcactggagttgatactgttttaggtccggagatgaaa
tcaactggtgaggttatggggatagccaataatttcggcttggcatttgcaaagagccaa
atagctgcttttgggccactgccaatttcaggtgctgtctttatttcactttcgcaacga
gataaggattctggttggcgctcagcaagaggattacatgaactaggatttaaaatttat
agcacggcaggtactcattcatatctgactgaaaaaggtattccatcggaaaaggttaga
aaaaactctgatcctcaaacagatcagttatctgccaatgatctgatcacgaaaggatta
gtacaattagttatcaatactccacttggacggggatctcgtcaggatggattcttgata
agaactgcagcgatttcacgatctgtcgcatgcataacaactattccaggctttaaagca
gctgttgcggggataagcgctctgcaaaaagatgagtttggaattaaatctttgcaggag
tggatgcaatga
DBGET
integrated database retrieval system
