Candidatus Nanopelagicus limnae: B1s21122_03450
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Entry
B1s21122_03450 CDS
T05073
Name
(GenBank) 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
abam
Candidatus Nanopelagicus limnae
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abam03009
]
B1s21122_03450
Enzymes [BR:
abam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
B1s21122_03450
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
B1s21122_03450
Ribosome biogenesis [BR:
abam03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
B1s21122_03450
23S rRNA modification factors
B1s21122_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
SYY_C-terminal
Methyltransf_25
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ASY09398
UniProt:
A0A249JXY7
LinkDB
All DBs
Position
604013..604801
Genome browser
AA seq
262 aa
AA seq
DB search
MKTRLDAELVRRELARSRESAVELITAGKVLVNGIPATKAASQVDAQISITLKDEQAEFV
SRGGHKLAGALDYFSNLTVEGKVALDAGASTGGFTDVLLKRGVKKVVAADVGYGQLAWQL
QSDDRVKILDRVNVRSLTKQQVGDEIDLVVADLSFISLKLVLPALIEVAKEDADFLVMVK
PQFEVGKEKLGAGGVVRDSHLRKEAVAAVADVAFSLGLGCLGVVASPLPGPSGNVEYFLW
LNKAGKALLEVDLDLAIEKGPA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccggctagatgcggagttggtcagacgcgaactagctcgatctagagagagc
gcagttgaattaatcaccgctggcaaagttttagtcaatggtattccagcaacaaaagca
gcatcccaagttgatgctcaaatttccattactttaaaagatgaacaagcagagtttgta
tctcgaggcggtcataaactagctggtgcgttagattatttttctaatttaaccgtagaa
ggcaaagtagctctagatgctggggcttcaacgggtggtttcacagatgtgttgttaaaa
cgtggggttaagaaagttgtggctgcagatgtgggttacggtcaactagcttggcaatta
caaagtgatgaccgggtaaaaatattagatcgagttaatgttcgctctcttaccaagcag
caggtaggagatgagatcgacctagtagtagcagatctttctttcatatctttaaaatta
gtattacctgccttaatagaggtggcaaaggaggacgctgattttttggttatggtaaaa
cctcaatttgaggtgggcaaagagaaattaggagcaggcggagttgttcgagattcacat
ctgcgcaaagaagctgtggcagcggttgcagatgttgctttttcactgggtttaggctgt
ttaggggtggtagcaagcccacttccaggacctagtggcaatgttgagtactttttgtgg
ttgaacaaagcgggtaaagccttattagaagtagatttagatcttgcgattgaaaagggg
ccagcatga
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