Candidatus Nanopelagicus limnes: B1s21122_03495
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Entry
B1s21122_03495 CDS
T05073
Name
(GenBank) phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B1s21122_03495
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abam01007
]
B1s21122_03495
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abam03016
]
B1s21122_03495
Enzymes [BR:
abam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
B1s21122_03495
Amino acid related enzymes [BR:
abam01007
]
Aminoacyl-tRNA synthetase
Class II (U)
B1s21122_03495
Transfer RNA biogenesis [BR:
abam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
B1s21122_03495
Prokaryotic type
B1s21122_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ASY09403
UniProt:
A0A249JXY9
LinkDB
All DBs
Position
590656..593118
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AA seq
820 aa
AA seq
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MKIPLSWLQDFVTLPAKISPEQISQAFVKVGFEVEAIEEQGTNLKGPLVVGKVLSIEELS
GHKKPIRFVGLDVGEKKIRYVICGARNFKVNDLVVVALPGAVLPGDFKISARETYGKVSD
GMICSAKEIGISEEHAGIIVLPEGKIGQDAMALLDVNDVIFDIAVNPDRGYAMSVRGLAR
ELAGSLQLKYVDPADPKIAKKFGRKNQKAVSVKIEDKSGADQIYIRTLDQVNVKKSTPLW
MQRRIEKCGMRSISLAVDITNYVMLELGQPLHAFDAQYIMGGLRVVRAGKFTKLTTLDKI
DRKLDPDNLLIADSKTPLALAGTMGGLASEVTNETTKIALEAAHFDPLSIARNSRSHNLS
SEASRRIERNTDPALAQIASARATQLLIDLADAKYVGTSQAGLPIKNRKVKISQSKISRY
LGFTYTSKQVKNALTLVGCKVTGSADLLTVEVPTWRPDLINFADFAEEIARLNNYDLIPA
TLPIGKGGAQLNGMQYRKRAVAIALANQGFTEVINYPFVSQEMVDLLGFTGDRTKSFKIA
NPMSEEFPLLRTHLLPGLLTTAVRNIGRGSKNLAIFEIGTIFRNTTALGKAVNPGISKRP
SEKVIKEIYDGVPKQMLFVGAVVTGETILSDWQGSGNKFTWSDAIAKAQEIIESTGNDFE
VVSSDLAPWHPGRCAELRVNGKPVAHAGELHPRVITALNLPERSCAFAVILSELPAAGVT
KAPPIWSFPAVVQDVALVVEAKIAAADLTAALKQGAGPLLESIVLFDRYDQMAENKVSLA
FTLTFRASDRTLTSDEVAGYRDQAIAQAGKSVGAVLRGNA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaagattccattaagttggctgcaagattttgtaacccttccagcgaaaatcagtcct
gaacaaatctctcaagcttttgtaaaggtgggttttgaagttgaagcaattgaagagcaa
ggcacaaacttaaaaggaccgctggtagttggaaaagttctttcaattgaagagttatct
ggacataagaaacctattagatttgtgggtttagatgttggcgagaaaaagatacgttat
gttatttgtggagcacgtaattttaaggttaatgacttagttgtcgtggctctgccagga
gctgtacttccaggcgacttcaaaatttcagccagagaaacctatggcaaagttagcgat
ggcatgatttgctcggctaaagaaattggtatcagtgaagaacatgcaggaattatagtt
ttgccagaaggcaagatcggccaagatgccatggctctactggacgtgaacgatgtgatt
tttgatatcgcagtaaatcctgatcgaggttatgcaatgtcggttaggggattagctaga
gaattagctggctcacttcagcttaaatatgtagatccagctgatcctaagattgctaag
aagtttggaagaaagaatcaaaaggctgtttctgtaaagattgaagacaaatcaggagct
gatcagatttacatcagaactttagatcaagtgaatgtgaagaaaagcaccccgttatgg
atgcaacgaaggattgaaaaatgcgggatgagatctatttcgttggctgttgatattaca
aattatgtgatgctagaacttgggcaaccattacacgcctttgatgcgcaatacattatg
ggtggattgcgggtagtcagggctggaaaattcactaagttaacaaccttggataaaatt
gatcgtaaattagatcctgataatttattgattgctgattcaaaaactcccttagctttg
gctggaactatgggaggtttagcttcagaagttactaatgaaacaaccaaaattgcacta
gaagccgcgcattttgatccactaagcattgctcgaaattcaagatcacataatttatct
agtgaagcctctcgtaggatagaacgtaatactgatccagcattggcgcagattgcttct
gctagggccacgcaattactgattgatttagctgatgcaaagtatgtgggtacatctcaa
gcaggacttccaattaagaatcgcaaggtgaaaatctcgcaatccaaaatctctagatac
cttggttttacctatacgtccaagcaggtaaaaaatgcattgacgttagttggttgcaaa
gttactggcagcgcagacttgttaactgtggaggtccctacctggcgcccagatttaata
aactttgcagatttcgctgaggaaatagctcgtttgaataattacgacttaatacctgcc
acccttccgatcggaaaaggtggagctcaattaaatggaatgcagtatagaaaacgtgct
gtggctattgctctggctaatcaaggatttaccgaagttatcaattatccatttgtgagc
caggagatggttgatcttcttggttttactggcgatcgaactaaatcattcaaaattgct
aatccaatgtcagaagaattcccattattgcgaacacatctgctgcctggtttgcttacc
actgctgttcgcaacattggtaggggatcaaagaatcttgcgatctttgaaataggaact
atttttagaaataccactgcccttggaaaagcggttaacccagggattagcaaacgtccc
agtgagaaagtgattaaagaaatttatgatggtgtgccaaaacaaatgttgttcgttggc
gctgtagtaactggggagacgattttaagtgactggcaaggatcgggcaataaattcacc
tggagtgatgcaattgccaaggcacaggaaattatcgaatcaactggaaatgattttgaa
gttgtaagtagtgatttagctccatggcacccaggcagatgtgctgagttgcgggtaaat
ggaaaacctgttgcgcatgctggtgaattgcatccccgagtaataacagctttaaatttg
ccagaacgtagttgcgctttcgctgtaatcttaagtgaattgcctgcagctggcgtgact
aaagcacctcctatctggagttttccagcagtagttcaagatgtagcacttgttgttgag
gctaaaattgcggctgcagatttaactgccgcgcttaagcaaggtgctgggccgttatta
gaatctattgttttgtttgatcgttatgatcaaatggcagaaaataaagtatcactcgct
ttcactttaactttcagagcctcagatcgcacccttacatcagatgaggttgctggctat
cgtgatcaagcaattgctcaagcaggtaaatcagtgggcgcggttctgcgaggcaatgca
taa
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