Candidatus Nanopelagicus limnes: B1s21122_03660
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Entry
B1s21122_03660 CDS
T05073
Name
(GenBank) small subunit ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
B1s21122_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
abam03011
]
B1s21122_03660
Ribosome [BR:
abam03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
B1s21122_03660
Bacteria
B1s21122_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
DUF2110
S1_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ASY09435
UniProt:
A0A249JY36
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Position
556468..557802
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AA seq
444 aa
AA seq
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MTPSQIAVNDIGSAEDFLAAIEGTIKNFNDGDLVSGIVVQIDREEVLLDIGYKTEGVIPS
RELSIRHDVDPSELVKVGDRVEALVLQKEDKEGRLILSKKRAQYEQAWGDVEGKKERDEV
VTGTVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLTPYIGQQVECRIIELDKNRNNVVL
SRRAFLEQSQSASRTTFLNQLQKGQVRSGVISSIVNFGAFVDLGGVDGLVHVSELSWKHI
DHPSEVVEVGDEVTVEVLEVDFERERVSLSLKATQEDPWQAFARTHTINQVVPGEVTKLV
PFGAFIKVFEGIEGLVHISELAERHVEIPEQVVQVGDKLFVKIIDIDLERRRISLSLKQA
NEGQEVEVEAFDPTQYGMPARYDAEGKFIYPEGFDPETQEWKPGYESQREEWERQYAEAQ
SRFMAHKKQKAEAKAADAAAPAAE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctctcaaattgctgtaaacgatattggatctgccgaagattttttagccgct
atagaaggcacaattaagaattttaatgacggagacttagtctctggaatcgttgttcaa
atcgatcgtgaagaagttttattagatattggttacaaaaccgaaggtgttattccatct
cgtgaattatcaattcgacatgatgttgatccgagtgagttagttaaagttggtgaccgt
gttgaagctctagttcttcaaaaagaagacaaagaaggacgtttaatcctttccaaaaaa
cgtgcgcagtatgagcaggcatggggagatgttgaaggaaagaaagagcgtgatgaagtt
gtaactggaacagttattgaagtagttaagggcggactaatagttgatattggacttcgc
ggattcttaccggcatctttggttgaaatgcgaagagttcgagatctgactccttacatc
ggacaacaggttgaatgtcgaattatcgaattagataagaatcgcaacaatgtggtttta
tctcgcagagcattccttgagcaatctcaatctgcttcaagaacaacttttttaaaccaa
ctacaaaagggtcaggttcgatctggagttatttcttcaatcgttaactttggtgcattt
gttgatcttggtggcgttgatggcttggttcacgtatcagagctttcatggaaacacatt
gatcatccatctgaggtagtagaagttggcgatgaagttacagttgaagtacttgaggtt
gattttgaaagagaaagagtttcactatctcttaaggcaactcaagaagatccatggcaa
gcatttgctcgtactcacacaattaatcaagttgtgccaggtgaagtaactaagttagtc
ccattcggtgctttcattaaagtttttgaaggtattgaaggattagtacacatctctgag
ttagcagaacgccatgttgaaattccagagcaggtagttcaagttggagataagttgttt
gtaaagatcattgatattgatcttgagcgtcgccgtatttcactttcattaaagcaagca
aatgaaggacaagaggttgaggtcgaagcattcgatccaactcaatatggaatgccagct
cgttacgatgcagaaggcaaatttatttatccagaaggttttgatcctgaaactcaagag
tggaaaccaggatatgaaagtcagcgcgaagagtgggagcgtcaatacgcagaagcccag
tctcgctttatggctcacaagaagcaaaaggcagaggcaaaagcagctgatgctgccgct
cctgctgccgagtaa
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