Candidatus Nanopelagicus limnae: B1s21122_03750
Help
Entry
B1s21122_03750 CDS
T05073
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03030
DNA replication
abam03430
Mismatch repair
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1s21122_03750
03430 Mismatch repair
B1s21122_03750
03440 Homologous recombination
B1s21122_03750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abam03032
]
B1s21122_03750
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_03750
Enzymes [BR:
abam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1s21122_03750
DNA replication proteins [BR:
abam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1s21122_03750
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1s21122_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
ASY09450
UniProt:
A0A249JY55
LinkDB
All DBs
Position
532459..535986
Genome browser
AA seq
1175 aa
AA seq
DB search
MPISAGIPKNSENFVHLHVHTEYSMLDGAAKISELVAEVANQNMPAIAMTDHGNVFGAFE
FNKLAKAAGVKPIIGIEAYVAPESRFDKRRVKWAEGGEDDVSGGGAYTHMTLLAENNQGL
SNLFKLSSLASLEGFYYKPRMDQELLAKYSKGIIATTGCPGGEIQTRLRMGGYKEAVAAA
SRMRDIFGADNYFLEVMDHSIDIEKRVLTDLLKLGKELNLPLLATNDLHYTHHKDAAAHE
VMLCIQSGSTLADPKRFKFDNSEFYLKSAQQMRQLFKDLPGACDNTLLIAERCEITMREG
ENLLPRFPVPAGESEDSWLIKQSNQGLAAKMNDQIPPEYQERLNFELDVMIKMGFPGYFL
VVADLCNHARQVGIRVGPGRGSAAGSLVSYSLGITGLDPIKFGLLFERFLNPERISMPDI
DLDFDERRRSEMIAYATAQYGDDRVAQIITYGTIKSKQAIKDSTRVLGYPYALGERLTKS
LPPSVMGKDISLSGIFDMDNDRYGEASEFRNLYEADPDSKRIVDTALGIEGLKRQWGVHA
AGVILSKEPLLDVIPIHRREADGAIITQFDMGACEATGLLKMDFLGLRNLSVLDDCLINI
EKNLGKTIVLETLPLKDQKTFELLSRGDTLGVFQLDSAPIRSLLRSMAPDSFEDIAAVIA
LYRPGPMGEDSHNKYADYKNGRKAPVAIHPELDKPLNEILKDTYGLIVYQEQVLAIARKV
AGFTLGRADLLRKAMGKKDKKILDKERVHFEEGMKSNGFSEDATEKLWQTLIPFSDYAFN
RAHSAGYGLLSFWTAYLKANYPAEYMAALLTSVRDDKDKSALYLNECRRMGIKVLPPDVN
ESDSGYTPIGKDIRFGLTAIRNVGENVVASIIENRKIKGKYVSFGEFLAKVDSHVCNKKT
IESLIKAGAFDSLGHTRRGLMMVYLEALDAVGEAKRAEAIGQFDLFGSANTTSSVSGVDL
DIPNSEWEKMMLLGYEREMLGLYVSDHPLLGVEHILKSVADFSISQLSEVAHDQIISIGG
LITQIQRKVSKQGTPWAIVTVEDLEGAVDVLFFSNSYATHGVNLVEDRIVAIRGRVDKRE
EQPRISALDLTLPDLKQVPTGPLIISMAASRCTPPVIDRMSEILKSHPGAREVHLRLIDG
EKKTILKLDEALKVTSSPGLSADLKTVLGPDCLVV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccaatctcagccggaatcccaaaaaactcggagaattttgtgcaccttcatgtgcac
accgagtactcaatgctggatggggcagccaaaatatctgaattagttgctgaagttgct
aatcaaaatatgccagcgattgcaatgactgatcatggaaatgtttttggtgcatttgaa
tttaacaaattagcaaaagcagctggcgttaaaccaatcattggcattgaagcatatgta
gcacctgaatccagatttgataagcgcagagttaagtgggcagaaggcggtgaagatgat
gtttctggcggcggtgcttacactcacatgactttgctggccgaaaataatcagggatta
tcaaatctatttaaactctcatcccttgcatccttagaaggtttttattacaaaccaaga
atggatcaagagttgctagcgaaatactcaaaaggaatcatcgccaccactggctgtcca
ggcggggagattcaaactcgcttgcgcatgggtggctacaaggaagcggtagctgctgcc
tcacggatgcgagatatttttggagctgataactacttcttagaggtaatggatcactca
attgatattgaaaaacgagttctaacagatttgttaaagctgggtaaagaattaaatctg
ccattactagctactaatgatttgcactatacccatcataaagatgcagcggctcatgaa
gtgatgctttgtattcagtcaggttcaaccctggcagatccaaagcgattcaagtttgat
aactctgaattttatctaaagagtgcgcaacaaatgcgccagttatttaaagatttgcca
ggagcctgtgataacaccttattaattgctgagcggtgtgagataactatgcgagaaggt
gagaatcttctgccacgttttccagttccagcaggtgaaagtgaagatagctggttgata
aaacaatctaatcaaggtttagctgccaaaatgaatgatcagattccacctgagtaccag
gaaagacttaattttgaattagatgtaatgataaagatgggttttccaggttacttctta
gtggtggcagatctttgtaatcatgcgcgccaagttggaatccgagttggtccaggtaga
ggctcggctgcaggttcacttgtttcatactcgctaggtataaccggtcttgatccaatt
aagtttggcttactctttgagcgattcttaaatccagagcgaatctccatgccagatatt
gacttagattttgatgaaagaagacgatcagagatgatcgcttacgccacagctcaatat
ggtgatgatcgagtcgcacaaatcattacctatggcactattaaatctaaacaagcaatc
aaggactcaactcgagttttaggttatccctacgcactcggtgagcgattaactaaatca
cttccgccatcagtcatgggtaaagatatttcacttagtggaatttttgatatggataat
gaccgatatggcgaagccagtgagtttagaaatctgtatgaagcagatcctgactcaaaa
agaattgttgatactgcccttggcattgaaggcttaaagcgacaatggggagtgcatgca
gctggagttattttaagtaaggagcctttactcgatgtaattccaattcaccgtcgtgag
gcagatggggcaatcattacccagtttgatatgggtgcttgtgaagcaactggcttattg
aaaatggattttttaggtctgcgaaacctttcagttctagatgattgcttgataaatatt
gaaaagaatttaggtaagaccattgttttggaaaccttgccattaaaagatcagaaaact
tttgaattactttctcgaggtgacacccttggagtatttcagctagatagcgcaccaatt
agatcactccttagatctatggctccggatagttttgaagatattgcagctgttattgcg
ctttatcgaccgggtccaatgggtgaggattcacataacaaatatgccgattacaagaat
ggccgaaaggctccggtggctattcaccctgaattagataagccattaaatgagatccta
aaagatacttacggtttaattgtttatcaggagcaggtattagcgattgcccgaaaagtt
gctggtttcactcttggtcgcgcggatttgttaagaaaagcgatgggtaaaaaagataaa
aagattttggataaggaaagagttcattttgaagaaggtatgaaatcaaatggtttctct
gaggatgcaactgaaaaactctggcaaacactgattcctttctctgattatgcatttaat
agagctcatagcgcgggttatggtttgctctcattttggactgcctacctaaaggcaaat
tatccagctgaatacatggcagcacttctaacaagtgttagagatgataaagataagagc
gccttgtatttaaatgaatgcaggcgcatgggtattaaagttttacctccagatgttaat
gagtctgattctggctacacacctattggaaaagatattcgctttggcttaacagcaatt
cgaaatgttggtgaaaacgttgtggcttcaattattgaaaatcgaaaaattaagggtaag
tatgtaagttttggtgagtttctagccaaggtggattcacatgtttgcaacaagaaaact
attgaatccctcataaaggctggagcttttgattcacttggtcacactcgtcgtggattg
atgatggtttatttagaagcactagatgcagttggtgaagcgaagagggcagaggcgatt
gggcaatttgatctatttggttctgcaaatacaacatcttcagttagcggcgttgattta
gatattccaaatagcgagtgggaaaaaatgatgctcctgggttatgagcgagaaatgctt
gggctctatgtatccgatcatccactcctaggtgttgagcacattcttaaatcggtggca
gatttttcaattagccagctttcagaagttgctcatgatcaaataataagtattggtggc
ttaatcactcagattcaacgaaaggtttcaaagcagggaactccttgggcaattgttact
gttgaagatttagagggtgcggtggatgttctattcttctcaaattcttatgcaactcat
ggtgtaaatctggtcgaagatcgaattgttgcaattcgtggacgtgtagataagcgcgag
gaacaaccaaggatttctgctctagatttaacattgccagatttaaagcaagtaccaact
ggcccattgataatttctatggctgcatccagatgcacaccaccggttattgatcgcatg
agtgaaatattaaaatctcaccccggtgccagagaggttcacttaagacttatcgatggc
gagaaaaagacaatcttaaaacttgatgaagctttgaaggttacttcctcaccgggctta
agtgctgatcttaaaactgtacttggcccagactgcttagttgtttaa
DBGET
integrated database retrieval system
