Candidatus Nanopelagicus limnae: B1s21122_03930
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Entry
B1s21122_03930 CDS
T05073
Name
(GenBank) geranylgeranyl diphosphate synthase, type I
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00900
Terpenoid backbone biosynthesis
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
B1s21122_03930
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
B1s21122_03930
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
abam01006
]
B1s21122_03930
Enzymes [BR:
abam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
B1s21122_03930
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
B1s21122_03930
2.5.1.29 geranylgeranyl diphosphate synthase
B1s21122_03930
Prenyltransferases [BR:
abam01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
B1s21122_03930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ASY09484
UniProt:
A0A249JY80
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All DBs
Position
complement(498176..499249)
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AA seq
357 aa
AA seq
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MSFSATSDIKVIRAEINQVLAEFIKRENKYLAKIGPELDPVGIALEKFLLDSGKRLRPLF
AYVGLIGASAQLNKELVSAIASLELIHVCALVHDDVMDASDTRRGAPSIHKSFEKMHVDN
NLVGSSAQFGVASAILIGDLALIWSAQMLHNSGISSQDLIRALPIYDEMRVELMAGQYLD
VYEQSLGTQSIERSLKVARYKSGKYTIERPLHFGGALAGASSELMHAYSNYGLPLGEAFQ
LRDDLLGVFGDPSETGKPAGDDLREGKRTALLAVAQERANSVQSAELKKQIGDPNLTPSM
ISDLQQIITDTGATSHIEMMIEELTSTSLTALKHDGISPDGKQLLTELAILATNRKI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttttctgcgactagcgatatcaaagtgattcgtgctgagataaatcaggtgctt
gctgagtttataaagcgggaaaataagtaccttgccaaaatcggacctgaattagacccc
gttggaattgcacttgaaaaattcctcctcgatagcggaaaaagattacgccctttgttt
gcatacgttggattaattggagcatctgcccaactaaataaggaattagtttcagctatt
gcaagtcttgaattaattcatgtttgcgcattagtccatgatgatgtcatggacgcctct
gataccaggcgcggtgctcctagtattcataaatcttttgaaaaaatgcatgttgataat
aatttagttggatcttctgcccaatttggagtggcatcagcaattttaattggagattta
gcacttatttggtcagctcagatgcttcataactcgggaatatcaagtcaagatttaatt
cgagctctgccaatctacgatgaaatgcgagtagaacttatggcgggacaatacctagat
gtttacgagcagtctttgggaactcaaagtattgaaagatctcttaaagtagctcggtat
aaatctggtaaatacacgatagagcgacctctacattttggtggagcactagctggcgca
tcaagtgaattaatgcatgcctattcaaattatggattaccacttggtgaagcttttcaa
ctaagagatgatttattaggagtatttggagatccatcagaaacgggcaaaccagcaggt
gatgacttaagagagggaaagcgcaccgccctattagcagttgcacaagaacgagcgaat
tcagtgcaatctgctgaattaaaaaaacagattggagatccaaatctcactccaagcatg
atttcagatcttcagcagataattactgatacaggtgctacttctcacattgaaatgatg
attgaagaactcaccagcacttctcttactgctctaaagcatgatggaattagcccagat
ggtaagcagttactaactgaactagcgatccttgctactaatagaaagatttaa
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