Candidatus Nanopelagicus limnes: B1s21122_04020
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Entry
B1s21122_04020 CDS
T05073
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1s21122_04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abam03032
]
B1s21122_04020
Enzymes [BR:
abam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
B1s21122_04020
DNA replication proteins [BR:
abam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
B1s21122_04020
Elongation factors (archaeal)
B1s21122_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
ASY09501
UniProt:
A0A249JYA5
LinkDB
All DBs
Position
481887..482486
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AA seq
199 aa
AA seq
DB search
MIEQTLLKAGLKNIAGVDEAGRGPCAGPLVVAAVILKDPLSPALSEVKDSKELTELKREQ
LFDVVINNSITYSIIEITPQEIDQLGLHKCNIEGMRRAVNGLKNPPEYVLTDGYAIPGLT
IPNLSVWKGDQVAISISAASILAKVYRDRIMIALDKSYPNYGLASHKGYITALHTEAIKK
FGVLPIHRKSFANIAALLN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcaaaccctgcttaaagctggacttaaaaacatagcaggagtcgatgaagca
ggccggggaccatgtgctggtccattagttgttgcagcggtaattttaaaggatccactt
tcaccagcacttagcgaagtaaaagattcaaaagaacttactgagttaaagcgagaacaa
ctctttgatgtagtaattaacaattcgatcacttactcaataattgaaatcaccccacaa
gagattgatcaacttggactgcataaatgcaatattgagggtatgcgtcgagcggtaaat
ggattaaagaatccgccagagtatgtattaactgatggctatgccattccggggcttacc
atcccaaatctttctgtttggaaaggtgatcaagtagcaatatccattagcgctgcatca
atcttggcaaaggtatatcgagatcgaataatgattgctttggataaatcctatccaaat
tatggtttggcaagtcacaaagggtatataacagcgctacatactgaagctattaagaaa
tttggagtgctacccatacatagaaaatcattcgcaaacattgcagcacttcttaattga
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