Candidatus Nanopelagicus limnae: B1s21122_04425
Help
Entry
B1s21122_04425 CDS
T05073
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B1s21122_04425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abam01007
]
B1s21122_04425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abam03016
]
B1s21122_04425
Enzymes [BR:
abam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
B1s21122_04425
Amino acid related enzymes [BR:
abam01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
B1s21122_04425
Transfer RNA biogenesis [BR:
abam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
B1s21122_04425
Prokaryotic type
B1s21122_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
MreB-like_C
TIR_2
Motif
Other DBs
NCBI-ProteinID:
ASY09574
UniProt:
A0A249JYG8
LinkDB
All DBs
Position
406038..407753
Genome browser
AA seq
571 aa
AA seq
DB search
MLKMSTLLLRTLRDDPADAEVASHRLLVRAGFVRRVAAGIYSWLPLGYRTYRKIENVVRQ
EMDKAGFQEVHFPALLPKDPYESTNRWAEYGPDLFRLQDRKGNDYLLGPTHEEMFTLMVK
GEFSSYKDLPLSIYQIQTKYRDEPRPRSGIIRGREFVMKDSYSFDVDDAGLEVSYNKHRQ
AYINTFDRLGLKYNIVSAMSGAMGGSKSEEFLAPCPTGEDTYVLCNGCGYAANVEAMITK
VTPFKGEKVGAIEVLDTPNTPTIDSLVQVFNSKYGANVTAGDTLKNVLLMADKKAIAVLV
PGDREVDLKRLEANLAGVKELRLFEDADFAKHPKLVKGYVGPQDAKAFGITLYADPRIVE
GSHWITGANQKDKHARFVTCGRDFKVDQYIEAAEVRAGDNCPKCEKPVVIDRAIEIGHIF
QLGRKYAQSLGLTVLDKEGKPVVVTMGSYGIGVSRAVAAIAEQTYDELGLNWPAEVAPAD
VHIVATGKEDQPFDVAEQIAKDLEAKGLEVLLDDRREASAGVKFKDAELIGIQKIIIVGK
ALADGKVEVRDRKSGDKQEVALADVVKTIVK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatgtccaccttattgttgcgcacactgcgtgatgatccagctgatgctgag
gttgcatcccaccgcttattagttagagcaggatttgtaagaagagttgccgctggtatt
tattcatggttaccacttggttatcgaacatatcgcaagattgaaaatgttgttaggcaa
gagatggataaagctggattccaagaggttcactttccagcacttttgccaaaggatcct
tatgagtcaacaaatcgttgggctgagtacggaccagatctatttagattacaagatcga
aaaggtaatgattacttactaggaccaacccatgaggagatgttcactcttatggttaaa
ggtgagttttcttcatataaagatttgccattatcgatctatcaaattcaaactaagtat
cgagatgaaccacgtcctaggagtggaattattagagggcgcgagtttgtgatgaaggat
tcatacagctttgatgttgatgatgctggtcttgaggtttcttataacaaacatcgccaa
gcttatataaatacctttgatcgcttaggtcttaaatacaacattgtctctgcgatgagc
ggtgcgatgggtggatcaaaatcagaggagttcctagctccatgcccaacaggtgaagac
acatatgttttatgtaatggctgtggttatgccgcaaatgtggaggcaatgattactaag
gtcacaccatttaagggagaaaaagtaggcgcaattgaagttctagatacacctaatacg
ccaactattgattcattagttcaagtttttaatagtaaatacggcgcgaatgtcaccgca
ggtgataccttaaaaaatgttttattgatggctgataaaaaagccatagcggttttagta
ccaggtgatcgtgaggttgatttaaagcgattggaagcaaatttagctggcgttaaagag
ctacgtttatttgaggatgctgactttgctaaacatccaaagttagtaaaaggttatgtt
ggaccacaagatgcgaaagcatttggaattacgttatatgccgatccaagaattgtagaa
ggatcacattggattaccggtgctaatcaaaaggataagcacgcccgatttgtaacatgc
ggccgtgattttaaggttgatcaatatattgaagcagcagaggttcgagctggtgataac
tgtccaaagtgtgaaaagccggtagtaattgatcgagcaattgaaattggccatatcttt
caactaggcagaaaatacgcgcaatcacttgggcttaccgtgctagataaagaaggtaag
ccagttgttgtaacaatgggatcttatggaattggtgtatcaagagcggtagccgccatt
gctgaacaaacttatgatgagcttggtttaaattggccagcagaggtagcacctgctgat
gttcatattgtggcaactggtaaagaggatcaaccatttgatgtggcagaacaaattgct
aaagatctagaggcaaaagggcttgaggtactccttgatgatcgcagggaggcatctgct
ggagttaagtttaaagatgctgaattaatcggaattcaaaagataattattgttggtaaa
gcattagcagatggcaaggttgaagtgcgggatcgtaaatctggtgataagcaagaggtt
gcgctcgcagatgttgttaaaacaatagttaagtaa
DBGET
integrated database retrieval system
