Candidatus Nanopelagicus limnae: B1s21122_04445
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Entry
B1s21122_04445 CDS
T05073
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00250
Alanine, aspartate and glutamate metabolism
abam00280
Valine, leucine and isoleucine degradation
abam00310
Lysine degradation
abam00410
beta-Alanine metabolism
abam00640
Propanoate metabolism
abam00650
Butanoate metabolism
abam01100
Metabolic pathways
abam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B1s21122_04445 (gabT)
00650 Butanoate metabolism
B1s21122_04445 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B1s21122_04445 (gabT)
00280 Valine, leucine and isoleucine degradation
B1s21122_04445 (gabT)
00310 Lysine degradation
B1s21122_04445 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B1s21122_04445 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abam01007
]
B1s21122_04445 (gabT)
Enzymes [BR:
abam01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
B1s21122_04445 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
B1s21122_04445 (gabT)
2.6.1.48 5-aminovalerate transaminase
B1s21122_04445 (gabT)
Amino acid related enzymes [BR:
abam01007
]
Aminotransferase (transaminase)
Class III
B1s21122_04445 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
MC3
Motif
Other DBs
NCBI-ProteinID:
ASY09578
UniProt:
A0A249JYG2
LinkDB
All DBs
Position
complement(401136..402488)
Genome browser
AA seq
450 aa
AA seq
DB search
MYSEAKKPVAQKRKLVTAIPGPKSAELIKRRGEAVSASLGTAFPVFIDHAQGAIIVDVDG
NSILDLGAGIAVLNVGHSQNRVAERVKTQIDAFSHTCFMVVPYTGYVEVCEALNRLTPGT
HKKKSALFNSGAEAIENAVKIARKFTKRSAVVVFEHGYHGRTNLTMAMTAKNMPYKDGFG
PFAPEVYRMPMAYSYRCDACTKPCESSVLSTVIHKIEKEIGASNVACIVIEPILGEGGFI
VPCKGFLPGLAKFCKENGIVFVADEVQTGFARTGTMFACEDESIIPDLIVTAKGIAAGLP
LAGVTGRAEIMDSIHLSGLGGTYGGNPVACAAALGAIEVIEQDNLVARAKKIGEIMHQEL
TAMMKKHSIIGEVRGRGAMQAIELVKPGTNEPNPEALTTAIKYCTSKGVLILSAGTYANV
IRLLPPLVIEEDLLRDGLSVLDEALASISS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagaggcgaaaaaaccggtagcgcaaaaacgaaagctagtaactgctatcccc
ggacctaaatctgctgagctaattaagcgcagaggcgaggcggtctctgcctcactcgga
actgcattccctgtttttattgaccacgcacaaggtgcaatcattgttgatgttgatggt
aattcaattttagatttaggcgcaggtattgcggtattaaatgttggtcactcacaaaat
cgtgtagcagagcgagtaaaaactcaaattgatgcctttagtcatacctgttttatggtt
gtgccatacaccggttatgttgaagtgtgtgaagcgctaaaccgattaacccctggcact
cataaaaagaagtccgctcttttcaactcaggtgctgaggcaattgaaaacgcagtgaag
attgctcgcaaatttaccaagcgatctgcagttgttgtttttgaacatggctatcacgga
agaactaatttaactatggcaatgactgctaagaacatgccatacaaagatggatttgga
ccatttgcccctgaggtttatcgaatgccgatggcatactcctatcgatgcgatgcatgc
accaaaccttgtgaaagctctgttttatctacggtaatccataaaattgaaaaagaaatt
ggcgccagtaatgttgcttgtattgtgatagagccgattcttggtgaaggtggatttatt
gttccatgtaaaggtttcctacctggacttgctaaattctgtaaagaaaatgggattgtt
tttgtggcagatgaggttcaaactggatttgcacgaactggaactatgtttgcctgtgaa
gatgaatcaataatcccagatttaatagtaactgccaagggaattgccgccggtctacca
cttgccggtgtcaccgggcgtgctgagatcatggattcaattcatctatctggccttggt
ggcacatatggtggaaacccagttgcatgtgctgcagctcttggcgcgattgaagttatt
gagcaagataatttagttgctcgtgcaaagaaaattggtgagattatgcaccaagagtta
actgcaatgatgaagaagcattcaatcattggcgaggttagaggtcgtggcgccatgcaa
gctattgaattggttaagcctggaactaatgagccaaatcctgaagcattaacaactgca
attaagtactgcaccagtaaaggtgtattaattctttcagctggcacatatgccaacgta
attagattacttccaccgcttgttattgaagaggatttactacgcgatggcttatctgta
ttagatgaggcgctagcctcaatttcttcttaa
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