Candidatus Nanopelagicus limnae: B1s21122_04545
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Entry
B1s21122_04545 CDS
T05073
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00260
Glycine, serine and threonine metabolism
abam00270
Cysteine and methionine metabolism
abam00680
Methane metabolism
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
abam01120
Microbial metabolism in diverse environments
abam01200
Carbon metabolism
abam01230
Biosynthesis of amino acids
Module
abam_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
B1s21122_04545
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1s21122_04545
00270 Cysteine and methionine metabolism
B1s21122_04545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abam04147
]
B1s21122_04545
Enzymes [BR:
abam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
B1s21122_04545
1.1.1.399 2-oxoglutarate reductase
B1s21122_04545
Exosome [BR:
abam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
B1s21122_04545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
KARI_N
ACT_AHAS_ss
RS_preATP-grasp-like
NAD_binding_2
ACT_4
F420_oxidored
Gp_dh_N
UDPG_MGDP_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ASY09597
UniProt:
A0A249JYJ4
LinkDB
All DBs
Position
378023..379627
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AA seq
534 aa
AA seq
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MRRVAKPVVLIAEELSPATLEALGPDFEVRNCNGADRAELLAALSKGVDAVLIRSATKMD
AEAIAAAKGLKVIARAGVGLDNVEIPAATAAGVMVVNAPTSNIVSAAELAIGLLLASARF
ISPAHTALQNGKWARSKYTGAELFEKTLGIVGFGRIGQLVAHRMQAFGMDVVAYDPYLQP
ARAAQLNVKLVELDELLRVSDFITIHLPKTKETANLIGTEALSKVKPTVRIINAARGGVL
DETALYEALKAGKVGGAGLDVFATEPCTDSPLFTLDNVVATPHLGASTDEAQERAGIAVA
ISVRKALSGELVPDAVNVKGGAIDQAVRPALPLVEKLAQVATALANDVISSIDVEVRGEI
STLDVSVLATSALKGALLAMGAEDVTYVNAPALAAERSISSTVSTDSESPDHRNLVSVRA
ACADGSQVFVSGTLMGIKQTQKIVAIDKLDLDLKPTNNLLFLRYTDRPGVVGVVGNALGK
LKINIADMQVGRTQEGGQALMALTVDSVIPKEIIDVIAKETGASLVRFVNLVNE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcgtggctaaaccagtagtacttatcgctgaagagttaagtccagccacatta
gaggcgctcggacctgactttgaggtgcgcaattgcaatggcgcagatcgtgcagagtta
ttagctgctctttctaagggagtagatgcggtattaattcgctctgctaccaagatggat
gccgaggcaattgcagcagcaaagggattaaaggtaattgcgcgagctggtgttggttta
gataatgttgaaattccagctgcaaccgctgctggtgtaatggtggttaacgcacctacc
tcaaatattgtctccgctgctgaacttgcaattggattactccttgctagcgcaagattt
atctcaccagcacatacagctttacaaaacggcaagtgggcaagatctaaatacaccggc
gctgaattgtttgaaaaaactctaggaattgttggctttggccgtattggtcaattggta
gcccaccgaatgcaagcatttggtatggatgtagttgcttatgatccttatctacaacca
gcaagggctgcgcaattaaatgttaagttagttgagttagatgagttgttaagagtgagt
gatttcatcactattcatttaccaaaaactaaagagacagcaaatttaattggtaccgag
gcgttaagtaaggttaagccaacggtaagaattattaatgctgcccgcggtggagtatta
gatgagaccgcactttatgaagcactcaaagctggcaaggtaggtggcgctggtcttgat
gtatttgcaacagagccttgtacagattcaccattgtttacattagataatgtggtggca
actcctcaccttggcgcttcaactgatgaagcacaagagcgcgctggaattgctgttgcg
atctcagtaagaaaagctttatctggtgagttagtaccggatgcggtaaatgttaaaggt
ggcgcgattgatcaagcagtgcgcccagcgctgccactagttgaaaaattagcgcaggtt
gcaaccgccttagcaaatgatgttatctcctcaattgatgttgaggtaagaggtgagatt
tcaactcttgatgtttcagttcttgcaactagtgcgctaaagggagcactgcttgcaatg
ggcgctgaggatgttacatatgtaaacgccccagcattagcagcagagcgatcaattagc
tcaacagtttcaactgattctgaaagcccagatcatcgtaatttggtttcagtaagagca
gcttgtgctgatggcagccaagtatttgttagtggaactttgatgggaattaaacagacc
caaaagatcgtggcaattgataagttagatctagatcttaagccaacaaataatttgcta
ttcctgcgttataccgatcgcccaggtgtggttggtgtagttggaaatgcattaggtaag
ttgaaaatcaatattgcagatatgcaggttggtcgcacccaggaaggtggccaagcttta
atggcactaactgttgattcagttattcctaaagagatcattgatgtgattgcaaaagaa
actggggcatccttagttcgctttgtgaatttggtgaatgagtga
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