Candidatus Nanopelagicus limnae: B1s21122_05560
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Entry
B1s21122_05560 CDS
T05073
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00450
Selenocompound metabolism
abam00970
Aminoacyl-tRNA biosynthesis
abam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
B1s21122_05560
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B1s21122_05560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abam01007
]
B1s21122_05560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abam03016
]
B1s21122_05560
Enzymes [BR:
abam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
B1s21122_05560
Amino acid related enzymes [BR:
abam01007
]
Aminoacyl-tRNA synthetase
Class I (U)
B1s21122_05560
Transfer RNA biogenesis [BR:
abam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
B1s21122_05560
Prokaryotic type
Other AARSs
B1s21122_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Anticodon_3
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ASY09778
UniProt:
A0A249JZ07
LinkDB
All DBs
Position
165818..167374
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AA seq
518 aa
AA seq
DB search
MAEKSFYLTTPIYYVNDAPHIGHAYTTVAGDVLTRWHRQRGESVWFLTGTDEHGQKVLNT
AQANNTSPQDWCDKLVDSAWKPVWKDLNIANDDFIRTTEDRHSIRVQKFLQGLKDSGHIY
AGKFEGPYCIGCEEFKLPGDLDEGKCKIHSKPVEMLSEDNWFFKLSAFKQPLLDYYKSNP
DACQPESARNEVISFLEGEVRDLSISRSTFDWGIPVPWDTKQVIYVWFDALLNYATAVGL
GDEASSDGGKKFAKTWPADVHLVGKDILRFHAIIWPAMLMAAGVAVPKKIFAHGWLLVGG
EKMSKSKLTGIAPSDITKDFGVDAFRYYFLKAIPFGSDGSFSWEDMAARYTSELANDFGN
LASRLIAMIEKYCEGKIPSIAKDESLAALLDQSVKSADEAICALDFQGGINTIMDFCKRV
NGYVTEKEPWVVAKDSSRKSELDGILYNTAESLRALAVLLHPVMPEVTEKLWQSLGAQSS
LGDLGKQQISKVANWGQLPAGSVVTKTDVLFPRLEEVK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaatctttttatttaactacgcccatttactatgtgaatgacgcgccccat
attggccatgcttacacaactgttgctggtgatgttttaacccgttggcatcgccaacgt
ggtgagtcagtttggtttcttaccggtactgatgaacatggccaaaaagtattaaatact
gcgcaagcaaataacacatcacctcaggattggtgtgacaaattagtagattctgcatgg
aagccagtttggaaagatttaaatattgccaatgatgatttcattagaaccacagaggat
cgacacagcattcgagtccaaaaattcctccaaggcttaaaagattcaggacacatttat
gccggaaagtttgaaggcccatattgcattggttgcgaagagtttaagttgcctggtgat
ttagatgaaggtaagtgcaagatccactccaagccagttgaaatgttaagtgaagataat
tggttctttaaattatcagccttcaaacaaccattacttgattactacaaatcaaaccca
gatgcatgccagccagaaagtgctcgtaatgaggttatttcatttttagaaggtgaagtt
agggatctttcaatctcaagatccacctttgattggggaataccagttccatgggatacc
aagcaggttatctatgtttggtttgacgcgttattaaattatgcaacagctgttggatta
ggtgatgaggcatctagtgatggtggaaagaagtttgctaaaacttggccagctgatgtg
cacctagttggtaaagatattttgcgctttcacgcaattatctggccagcaatgttgatg
gcagcaggggtagcagtccctaagaaaatatttgctcacggctggttgctagttggtggt
gagaaaatgtctaagagtaagttaaccggcattgccccatctgatatcacaaaagatttt
ggagtagatgcttttagatactactttttaaaagctattccatttggcagcgatggctca
ttttcttgggaggatatggcagctagatacaccagtgaattagcaaatgattttggcaat
ttagcttctagattaatagcaatgattgaaaagtattgcgaaggaaaaattccaagtatc
gctaaagatgaatcactcgctgccttgttagatcaaagtgtaaagagtgctgatgaagca
atttgcgcacttgattttcaaggcggcataaatacaattatggatttttgtaagagagta
aatggatatgtaactgagaaagagccatgggtagtggcaaaggattcatctagaaagtct
gagcttgatgggattttatataacaccgctgaatcacttcgcgcattagctgtattactt
catccagtaatgcctgaggtaacggaaaaactctggcaatcactgggcgctcaatcttca
cttggcgaccttggtaagcaacaaataagtaaggtagcaaactggggacaattaccagcc
ggaagtgttgtaacaaaaactgatgtgctatttccaagattagaagaggttaagtaa
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